ISDA: 9ECA

Deposition Date 2024-11-13

Release Date 2025-11-19

Last Version Date 2025-11-19

Entry Detail

PDB ID:

9ECA

Keywords:

RNA BINDING PROTEIN/RNA

Title:

Intermediate state of wild-type EsCas13d ternary complex with C4A mismatch

Biological Source:

Source Organism:

[Eubacterium] siraeum DSM 15702 (Taxon ID: 428128)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.19 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:EsCas13d
Gene (Uniprot):EUBSIR_02687
Chain IDs:A
Chain Length:954
Number of Molecules:1
Biological Source:[Eubacterium] siraeum DSM 15702

UniProt ID:B0MS50

Polymer Type:polyribonucleotide
Molecule:crRNA
Chain IDs:B
Chain Length:52
Number of Molecules:1
Biological Source:[Eubacterium] siraeum DSM 15702

Polymer Type:polyribonucleotide
Molecule:Target RNA
Chain IDs:C
Chain Length:30
Number of Molecules:1
Biological Source:[Eubacterium] siraeum DSM 15702

Ligand Molecules

Primary Citation

Structural Basis for Target Discrimination and Activation by Cas13d

Chou, C.W, Finkelstein, I.J.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form