9E3L image
Deposition Date 2024-10-23
Release Date 2025-10-29
Last Version Date 2025-10-29
Entry Detail
PDB ID:
9E3L
Keywords:
TOXIN/Immune System
Title:
Cryo EM structure of pertussis toxin in complex with neutralizing Fab PERT-169 and PERT-203
Biological Source:
Source Organism:
Bordetella pertussis (Taxon ID: 520)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Bordetella pertussis
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9E3L validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pertussis toxin subunit 1
Gene (Uniprot):ptxA
Chain IDs:A
Chain Length:269
Number of Molecules:1
Biological Source:Bordetella pertussis
UniProt ID:T1SR96 Pfam ID:PF02917
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Islet-activating protein S2
Gene (Uniprot):ptxB
Chain IDs:B
Chain Length:226
Number of Molecules:1
Biological Source:Bordetella pertussis
UniProt ID:A0A0E8DFW5 Pfam ID:PF03440, PF02918
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pertussis toxin subunit 3
Gene (Uniprot):ptxC
Chain IDs:C
Chain Length:227
Number of Molecules:1
Biological Source:Bordetella pertussis
UniProt ID:P04979 Pfam ID:PF03440, PF02918
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pertussis toxin subunit 4
Gene (Uniprot):ptxD
Chain IDs:D, E
Chain Length:152
Number of Molecules:2
Biological Source:Bordetella pertussis
UniProt ID:P0A3R5 Pfam ID:PF09275
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pertussis toxin subunit 5
Gene (Uniprot):ptxE
Chain IDs:F
Chain Length:133
Number of Molecules:1
Biological Source:Bordetella pertussis
UniProt ID:P04981 Pfam ID:PF09276
Polymer Type:polypeptide(L)
Molecule:PERT-203 HC
Chain IDs:G
Chain Length:233
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PERT-203 LC
Chain IDs:H
Chain Length:219
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PERT-169 HC
Chain IDs:I, K
Chain Length:230
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PERT-169 LC
Chain IDs:J, L
Chain Length:216
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
NA
Primary Citation
Cryo EM structure of pertussis toxin in complex with neutralizing Fab PERT-169 and PERT-203
To Be Published ? ? ? (?)
Primary Citation of related structures
9E3L