9E2G image
Entry Detail
PDB ID:
9E2G
EMDB ID:
Keywords:
Title:
Cryo-EM structure of 48 nm repeat of microtubule doublet from T. brucei flagellum
Biological Source:
PDB Version:
Deposition Date:
2024-10-22
Release Date:
2025-03-12
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing family member C2
Chain IDs:A (auth: 0A), B (auth: 0B), C (auth: 0C), D (auth: 0D)
Chain Length:752
Number of Molecules:4
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing family member C2
Chain IDs:E (auth: 0E)
Chain Length:779
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Rib72 protein-like protein
Chain IDs:F (auth: 0F)
Chain Length:724
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:CMF34/CARP4
Chain IDs:G (auth: 0G)
Chain Length:779
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Flagellar protofilament ribbon protein, putative
Chain IDs:H (auth: 0H), I (auth: 0I), J (auth: 0J), K (auth: 0K)
Chain Length:385
Number of Molecules:4
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Cilia- and flagella-associated protein 53
Chain IDs:L (auth: 0M), M (auth: 0N)
Chain Length:483
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Meiosis-specific nuclear structural protein 1
Chain IDs:N (auth: 0O), O (auth: 0P)
Chain Length:436
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Nucleoside diphosphate kinase, putative
Chain IDs:P (auth: 0Q)
Chain Length:334
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Nucleoside diphosphate kinase, putative
Chain IDs:Q (auth: 0R)
Chain Length:349
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing protein
Chain IDs:R (auth: 0S)
Chain Length:422
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing protein
Chain IDs:S (auth: 0T)
Chain Length:422
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Cyclic nucleotide-binding domain-containing protein
Chain IDs:T (auth: 0U)
Chain Length:331
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:TbMIP23
Chain IDs:U (auth: 0V)
Chain Length:219
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP141
Chain IDs:V (auth: 0W)
Chain Length:130
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing protein
Chain IDs:W (auth: 0X)
Chain Length:270
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Calpain-like cysteine peptidase, putative
Chain IDs:X (auth: 0Y)
Chain Length:301
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing protein
Chain IDs:Y (auth: 0Z)
Chain Length:552
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Calcium-binding protein, putative
Chain IDs:Z (auth: 1A)
Chain Length:359
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing protein
Chain IDs:AA (auth: 1B)
Chain Length:297
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Peptidyl-prolyl cis-trans isomerase
Chain IDs:BA (auth: 1C)
Chain Length:282
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:EF-hand domain-containing protein
Chain IDs:CA (auth: 1D)
Chain Length:320
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP107/MC11
Chain IDs:DA (auth: 1E)
Chain Length:249
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:T. brucei spp.-specific protein
Chain IDs:EA (auth: 1F)
Chain Length:254
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP95/MC6
Chain IDs:FA (auth: 1G)
Chain Length:182
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP129
Chain IDs:GA (auth: 1H)
Chain Length:386
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:T. brucei spp.-specific protein
Chain IDs:HA (auth: 1I), IA (auth: 1J)
Chain Length:417
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP21
Chain IDs:JA (auth: 1K), KA (auth: 1L)
Chain Length:415
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Flagellar associated protein
Chain IDs:LA (auth: 1M), MA (auth: 1N)
Chain Length:415
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:TbRib26b
Chain IDs:NA (auth: 1O), OA (auth: 1P), WD (auth: 4X)
Chain Length:247
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:PACRGA
Chain IDs:PA (auth: 1Q), QA (auth: 1R), RA (auth: 1S)
Chain Length:300
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:PACRGB
Chain IDs:SA (auth: 1T), TA (auth: 1U)
Chain Length:312
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Cilia- and flagella-associated protein 20
Chain IDs:UA (auth: 1V), VA (auth: 1W), WA (auth: 1X), XA (auth: 1Y), YA (auth: 1Z), ZA (auth: 2A)
Chain Length:294
Number of Molecules:6
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Cilia- and flagella-associated protein 52
Chain IDs:AB (auth: 2B), BB (auth: 2C), CB (auth: 2D)
Chain Length:629
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Enkurin domain-containing protein
Chain IDs:DB (auth: 2E), EB (auth: 2F)
Chain Length:274
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Enkurin domain-containing protein
Chain IDs:FB (auth: 2G), GB (auth: 2H)
Chain Length:374
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MC4
Chain IDs:HB (auth: 2I), IB (auth: 2J), JB (auth: 2K)
Chain Length:369
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MC5
Chain IDs:KB (auth: 2L), LB (auth: 2M)
Chain Length:272
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:CCDC81 HU domain-containing protein
Chain IDs:MB (auth: 2N)
Chain Length:262
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Cilia- and flagella-associated protein 45
Chain IDs:NB (auth: 2O), OB (auth: 2P), PB (auth: 2Q), QB (auth: 2R)
Chain Length:483
Number of Molecules:4
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Trichohyalin-plectin-homology domain-containing protein
Chain IDs:RB (auth: 2S), SB (auth: 2T), TB (auth: 2U)
Chain Length:515
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Trichohyalin-plectin-homology domain-containing protein
Chain IDs:UB (auth: 2V), VB (auth: 2W), WB (auth: 2X), XB (auth: 2Y), YB (auth: 2Z), ZB (auth: 3A), AC (auth: 3B), BC (auth: 3C), CC (auth: 3D)
Chain Length:348
Number of Molecules:9
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:STOP axonemal protein
Chain IDs:DC (auth: 3E), EC (auth: 3F), FC (auth: 3G), GC (auth: 3H), HC (auth: 3I), IC (auth: 3J), JC (auth: 3K), KC (auth: 3L), LC (auth: 3M), MC (auth: 3N), NC (auth: 3O), OC (auth: 3P)
Chain Length:266
Number of Molecules:12
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MC8
Chain IDs:PC (auth: 3Q)
Chain Length:270
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MC3
Chain IDs:QC (auth: 3R)
Chain Length:325
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP90
Chain IDs:RC (auth: 3S)
Chain Length:191
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:PBP36
Chain IDs:SC (auth: 3T), TC (auth: 3U)
Chain Length:320
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Enkurin domain-containing protein
Chain IDs:UC (auth: 3V), VC (auth: 3W), WC (auth: 3X)
Chain Length:278
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Enkurin domain-containing protein
Chain IDs:XC (auth: 3Y), YC (auth: 3Z), ZC (auth: 4A)
Chain Length:269
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:PON3
Chain IDs:AD (auth: 4B), BD (auth: 4C), CD (auth: 4D)
Chain Length:420
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:PON4
Chain IDs:DD (auth: 4E), ED (auth: 4F), FD (auth: 4G)
Chain Length:337
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MC7
Chain IDs:GD (auth: 4H)
Chain Length:329
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP96C/MC15
Chain IDs:HD (auth: 4I), ID (auth: 4J)
Chain Length:350
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:FAP96B
Chain IDs:JD (auth: 4K), KD (auth: 4L)
Chain Length:286
Number of Molecules:2
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MOP23A
Chain IDs:LD (auth: 4M), MD (auth: 4N), ND (auth: 4O)
Chain Length:193
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MOP23B
Chain IDs:OD (auth: 4P)
Chain Length:191
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:MOP23C
Chain IDs:PD (auth: 4Q)
Chain Length:166
Number of Molecules:1
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:KIAA1430 homologue
Chain IDs:QD (auth: 4R), RD (auth: 4S), XD (auth: 4Y)
Chain Length:161
Number of Molecules:3
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Starmaker
Chain IDs:SD (auth: 4T), TD (auth: 4U), UD (auth: 4V), VD (auth: 4W)
Chain Length:867
Number of Molecules:4
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Tubulin alpha chain
Chain IDs:YD (auth: AA), AE (auth: AC), CE (auth: AE), EE (auth: AG), GE (auth: AI), IE (auth: AK), KE (auth: AM), ME (auth: AO), OE (auth: AQ), QE (auth: AS), SE (auth: AU), UE (auth: AW), WE (auth: AY), YE (auth: BA), AF (auth: BC), CF (auth: BE), EF (auth: BG), GF (auth: BI), IF (auth: BK), KF (auth: BM), MF (auth: BO), OF (auth: BQ), QF (auth: BS), SF (auth: BU), UF (auth: BW), VF (auth: BX), XF (auth: BZ), ZF (auth: CB), BG (auth: CD), DG (auth: CF), FG (auth: CH), HG (auth: CJ), JG (auth: CM), LG (auth: CO), NG (auth: CQ), PG (auth: CS), RG (auth: CU), TG (auth: CW), VG (auth: CY), XG (auth: DA), ZG (auth: DC), BH (auth: DE), DH (auth: DG), FH (auth: DI), HH (auth: DK), JH (auth: DM), LH (auth: DO), NH (auth: DQ), PH (auth: DS), RH (auth: DU), UH (auth: DX), WH (auth: DZ), YH (auth: EB), AI (auth: ED), CI (auth: EF), EI (auth: EH), GI (auth: EJ), II (auth: EL), KI (auth: EN), MI (auth: EP), OI (auth: ER), QI (auth: ET), SI (auth: EV), UI (auth: EX), WI (auth: EZ), YI (auth: FB), AJ (auth: FD), CJ (auth: FF), EJ (auth: FH), GJ (auth: FJ), IJ (auth: FL), KJ (auth: FN), MJ (auth: FP), OJ (auth: FR), QJ (auth: FT), RJ (auth: FU), TJ (auth: FW), VJ (auth: FY), XJ (auth: GA), ZJ (auth: GC), BK (auth: GE), DK (auth: GG), EK (auth: GH), GK (auth: GJ), IK (auth: GL), KK (auth: GN), MK (auth: GP), OK (auth: GR), QK (auth: GT), RK (auth: GU), TK (auth: GW), VK (auth: GY), XK (auth: HA), ZK (auth: HC), BL (auth: HE), DL (auth: HG), FL (auth: HI), HL (auth: HK), JL (auth: HM), LL (auth: HO), NL (auth: HQ), QL (auth: HT), SL (auth: HV), UL (auth: HX), WL (auth: HZ), YL (auth: IB), AM (auth: ID), DM (auth: IG), FM (auth: II), HM (auth: IK), JM (auth: IM), LM (auth: IO), NM (auth: IQ), QM (auth: IT), SM (auth: IV), UM (auth: IX), WM (auth: IZ), YM (auth: JB), AN (auth: JD), CN (auth: JF), EN (auth: JH), GN (auth: JJ), IN (auth: JL), KN (auth: JN), MN (auth: JP), NN (auth: JQ), PN (auth: JS), RN (auth: JU), TN (auth: JW), VN (auth: JY), XN (auth: KA), ZN (auth: KC), AO (auth: KD), CO (auth: KF), EO (auth: KH), GO (auth: KJ), IO (auth: KL), KO (auth: KN), MO (auth: KP), NO (auth: KQ), PO (auth: KS), RO (auth: KU), TO (auth: KW), VO (auth: KY), XO (auth: LA)
Chain Length:451
Number of Molecules:145
Biological Source:Trypanosoma brucei brucei TREU927
Polymer Type:polypeptide(L)
Description:Tubulin beta chain
Chain IDs:ZD (auth: AB), BE (auth: AD), DE (auth: AF), FE (auth: AH), HE (auth: AJ), JE (auth: AL), LE (auth: AN), NE (auth: AP), PE (auth: AR), RE (auth: AT), TE (auth: AV), VE (auth: AX), XE (auth: AZ), ZE (auth: BB), BF (auth: BD), DF (auth: BF), FF (auth: BH), HF (auth: BJ), JF (auth: BL), LF (auth: BN), NF (auth: BP), PF (auth: BR), RF (auth: BT), TF (auth: BV), WF (auth: BY), YF (auth: CA), AG (auth: CC), CG (auth: CE), EG (auth: CG), GG (auth: CI), IG (auth: CL), KG (auth: CN), MG (auth: CP), OG (auth: CR), QG (auth: CT), SG (auth: CV), UG (auth: CX), WG (auth: CZ), YG (auth: DB), AH (auth: DD), CH (auth: DF), EH (auth: DH), GH (auth: DJ), IH (auth: DL), KH (auth: DN), MH (auth: DP), OH (auth: DR), QH (auth: DT), SH (auth: DV), TH (auth: DW), VH (auth: DY), XH (auth: EA), ZH (auth: EC), BI (auth: EE), DI (auth: EG), FI (auth: EI), HI (auth: EK), JI (auth: EM), LI (auth: EO), NI (auth: EQ), PI (auth: ES), RI (auth: EU), TI (auth: EW), VI (auth: EY), XI (auth: FA), ZI (auth: FC), BJ (auth: FE), DJ (auth: FG), FJ (auth: FI), HJ (auth: FK), JJ (auth: FM), LJ (auth: FO), NJ (auth: FQ), PJ (auth: FS), SJ (auth: FV), UJ (auth: FX), WJ (auth: FZ), YJ (auth: GB), AK (auth: GD), CK (auth: GF), FK (auth: GI), HK (auth: GK), JK (auth: GM), LK (auth: GO), NK (auth: GQ), PK (auth: GS), SK (auth: GV), UK (auth: GX), WK (auth: GZ), YK (auth: HB), AL (auth: HD), CL (auth: HF), EL (auth: HH), GL (auth: HJ), IL (auth: HL), KL (auth: HN), ML (auth: HP), OL (auth: HR), PL (auth: HS), RL (auth: HU), TL (auth: HW), VL (auth: HY), XL (auth: IA), ZL (auth: IC), BM (auth: IE), CM (auth: IF), EM (auth: IH), GM (auth: IJ), IM (auth: IL), KM (auth: IN), MM (auth: IP), OM (auth: IR), PM (auth: IS), RM (auth: IU), TM (auth: IW), VM (auth: IY), XM (auth: JA), ZM (auth: JC), BN (auth: JE), DN (auth: JG), FN (auth: JI), HN (auth: JK), JN (auth: JM), LN (auth: JO), ON (auth: JR), QN (auth: JT), SN (auth: JV), UN (auth: JX), WN (auth: JZ), YN (auth: KB), BO (auth: KE), DO (auth: KG), FO (auth: KI), HO (auth: KK), JO (auth: KM), LO (auth: KO), OO (auth: KR), QO (auth: KT), SO (auth: KV), UO (auth: KX), WO (auth: KZ), YO (auth: LB)
Chain Length:442
Number of Molecules:142
Biological Source:Trypanosoma brucei brucei TREU927
Primary Citation
Trypanosome doublet microtubule structures reveal flagellum assembly and motility mechanisms.
Science 387 eadr3314 eadr3314 (2025)
PMID: 40080582 DOI: 10.1126/science.adr3314

Abstact

The flagellum of Trypanosoma brucei drives the parasite's characteristic screw-like motion and is essential for its replication, transmission, and pathogenesis. However, the molecular details of this process remain unclear. Here, we present high-resolution (up to 2.8 angstrom) cryo-electron microscopy structures of T. brucei flagellar doublet microtubules (DMTs). Integrated modeling identified 154 different axonemal proteins inside and outside the DMT and, together with genetic and proteomic interrogation, revealed conserved and trypanosome-specific foundations of flagellum assembly and motility. We captured axonemal dynein motors in their pre-power stroke state. Comparing atomic models between pre- and post-power strokes defined how dynein structural changes drive sliding of adjacent DMTs during flagellar beating. This study illuminates structural dynamics underlying flagellar motility and identifies pathogen-specific proteins to consider for therapeutic interventions targeting neglected diseases.

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Primary Citation of related structures