9E22 image
Deposition Date 2024-10-21
Release Date 2025-07-09
Last Version Date 2026-01-21
Entry Detail
PDB ID:
9E22
Keywords:
Title:
Cryo-EM structure of human cytoplasmic dynein-1 bound to LIS1 in the presence of ATP
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytoplasmic dynein 1 heavy chain 1
Gene (Uniprot):DYNC1H1
Chain IDs:A
Chain Length:4843
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Platelet-activating factor acetylhydrolase IB subunit beta
Gene (Uniprot):PAFAH1B1
Chain IDs:B (auth: E)
Chain Length:411
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Cryo-EM captures early intermediate steps in dynein activation by LIS1.
Nat Commun 16 7054 7054 (2025)
PMID: 40750582 DOI: 10.1038/s41467-025-62185-z

Abstact

Cytoplasmic dynein-1 (dynein) is an essential molecular motor in eukaryotic cells. Dynein primarily exists in an autoinhibited Phi state and requires conformational changes to assemble with its cofactors and form active transport complexes. LIS1, a key dynein regulator, enhances dynein activation and assembly. Using cryo-EM and a human dynein-LIS1 sample incubated with ATP, we map the conformational landscape of dynein activation by LIS1 and identify an early intermediate state that we propose precedes the previously identified dynein-LIS1 Chi state. Mutations that disrupt this species, which we termed "Pre-Chi", lead to motility defects in vitro, emphasizing its functional importance. Together, our findings provide insights into how LIS1 relieves dynein autoinhibition during the activation pathway.

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Primary Citation of related structures
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