9DYI image
Entry Detail
PDB ID:
9DYI
EMDB ID:
Title:
BEST2 + glutamate closed state
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-10-14
Release Date:
2025-01-15
Method Details:
Experimental Method:
Resolution:
3.03 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Bestrophin-2a
Chain IDs:A (auth: E), B (auth: D), C (auth: A), D (auth: C), E (auth: B)
Chain Length:509
Number of Molecules:5
Biological Source:Homo sapiens
Primary Citation
Neurotransmitter-bound bestrophin channel structures reveal small molecule drug targeting sites for disease treatment.
Nat Commun 15 10766 10766 (2024)
PMID: 39737942 DOI: 10.1038/s41467-024-54938-z

Abstact

Best1 and Best2 are two members of the bestrophin family of anion channels critically involved in the prevention of retinal degeneration and maintenance of intraocular pressure, respectively. Here, we solved glutamate- and γ-aminobutyric acid (GABA)-bound Best2 structures, which delineate an intracellular glutamate binding site and an extracellular GABA binding site on Best2, respectively, identified extracellular GABA as a permeable activator of Best2, and elucidated the co-regulation of Best2 by glutamate, GABA and glutamine synthetase in vivo. We further identified multiple small molecules as activators of the bestrophin channels. Extensive analyses were carried out for a potent activator, 4-aminobenzoic acid (PABA): PABA-bound Best1 and Best2 structures are solved and illustrate the same binding site as in GABA-bound Best2; PABA treatment rescues the functional deficiency of patient-derived Best1 mutations. Together, our results demonstrate the mechanism and potential of multiple small molecule candidates as clinically applicable drugs for bestrophin-associated diseases/conditions.

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Primary Citation of related structures