ISDA

Entry Detail

PDB ID:

9DYG

EMDB ID:

EMD-47303

Keywords:

RIBOSOME

Title:

iSAT-PNA-RA20, RA20-B-c class

Biological Source:

Source Organism:

Escherichia coli

PDB Version:

Deposition Date:

2024-10-14

Release Date:

2024-11-13

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

5.27 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein bL34
Chain IDs:B (auth: 2)
Chain Length:37
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0A7P5 Pfam ID:PF00468

Polymer Type:polyribonucleotide
Description:23S rRNA
Chain IDs:A (auth: CA)
Chain Length:1742
Number of Molecules:1
Biological Source:Escherichia coli

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL3
Chain IDs:C (auth: D)
Chain Length:204
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P60438 Pfam ID:PF00297

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL4
Chain IDs:D (auth: E)
Chain Length:201
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P60723 Pfam ID:PF00573

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL13
Chain IDs:E (auth: J)
Chain Length:142
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0AA10

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL14
Chain IDs:F (auth: K)
Chain Length:110
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0ADY3 Pfam ID:PF00238

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein bL17
Chain IDs:G (auth: N)
Chain Length:120
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0AG44 Pfam ID:PF01196

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein bL19
Chain IDs:H (auth: P)
Chain Length:113
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0A7K6 Pfam ID:PF01245

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein bL20
Chain IDs:I (auth: Q)
Chain Length:117
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0A7L3

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein bL21
Chain IDs:J (auth: R)
Chain Length:103
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0AG48

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL22
Chain IDs:K (auth: S)
Chain Length:110
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P61175 Pfam ID:PF00237

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL23
Chain IDs:L (auth: T)
Chain Length:93
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0ADZ0 Pfam ID:PF00276

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL24
Chain IDs:M (auth: U)
Chain Length:102
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P60624

Protein Blast

Polymer Type:polypeptide(L)
Description:Large ribosomal subunit protein uL29
Chain IDs:N (auth: Y)
Chain Length:63
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:C3SQY2 Pfam ID:PF00831

Ligand Molecules

Primary Citation

Domain consolidation in bacterial 50S assembly revealed by anti-sense oligonucleotide probing

Sheng, K, Dong, X, Aiyer, S, Lee, J, Djordjevic-Marquardt, S, Lyumkis, D, Williamson, J.R.Show

To Be Published ? ? ? (?)

Primary Citation of related structures