ISDA: 9DXH

Deposition Date 2024-10-11

Release Date 2026-01-21

Last Version Date 2026-01-21

Entry Detail

PDB ID:

9DXH

Keywords:

DNA BINDING PROTEIN

Title:

attPmm and attBmm bound serine integrase complex in the pre-rotation state

Biological Source:

Source Organism(s):

Bacillus subtilis (Taxon ID: 1423)

Expression System(s):

Escherichia coli 'bl21-gold(de3)plyss ag'

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.69 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Resolvase homolog YokA
Gene (Uniprot):yokA
Chain IDs:A, B (auth: C), G (auth: I), H (auth: K)
Chain Length:545
Number of Molecules:4
Biological Source:Bacillus subtilis

UniProt ID:O32006 Pfam ID:PF00239, PF07508

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (34-MER)
Chain IDs:C (auth: E), I (auth: M)
Chain Length:34
Number of Molecules:2
Biological Source:Bacillus subtilis

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (33-MER)
Chain IDs:D (auth: F), J (auth: N)
Chain Length:33
Number of Molecules:2
Biological Source:Bacillus subtilis

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (25-MER)
Chain IDs:E (auth: G), K (auth: O)
Chain Length:25
Number of Molecules:2
Biological Source:Bacillus subtilis

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (24-MER)
Chain IDs:F (auth: H), L (auth: P)
Chain Length:24
Number of Molecules:2
Biological Source:Bacillus subtilis

Ligand Molecules

Primary Citation

Structural Basis of Directionality Control in Large Serine Integrases

Shin, H.S, Rice, P.A.Show

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Primary Citation of related structures

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