ISDA: 9DXD

Deposition Date 2024-10-11

Release Date 2026-01-21

Last Version Date 2026-01-21

Entry Detail

PDB ID:

9DXD

Keywords:

DNA BINDING PROTEIN

Title:

attLmm bound serine integrase and RDF complex in the pre-rotation state

Biological Source:

Source Organism(s):

Bacillus (Taxon ID: 1386)

Expression System(s):

Escherichia coli 'bl21-gold(de3)plyss ag'

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.16 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Resolvase homolog YokA,SPbeta prophage-derived uncharacterized protein YotN
Gene (Uniprot):yokA, yotN
Chain IDs:A, B, C, D, I, J, K, L
Chain Length:620
Number of Molecules:8
Biological Source:Bacillus

UniProt ID:O32006,O34850 Pfam ID:PF00239, PF07508

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (34-MER)
Chain IDs:E, M
Chain Length:34
Number of Molecules:2
Biological Source:Bacillus

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (33-MER)
Chain IDs:F, N
Chain Length:33
Number of Molecules:2
Biological Source:Bacillus

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (25-MER)
Chain IDs:G, O
Chain Length:25
Number of Molecules:2
Biological Source:Bacillus

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (24-MER)
Chain IDs:H, P
Chain Length:24
Number of Molecules:2
Biological Source:Bacillus

Ligand Molecules

Primary Citation

Structural Basis of Directionality Control in Large Serine Integrases

Shin, H.S, Rice, P.A.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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