ISDA: 9DVD

Deposition Date 2024-10-07

Release Date 2025-10-15

Last Version Date 2025-10-15

Entry Detail

PDB ID:

9DVD

Keywords:

VIRAL PROTEIN/IMMUNE SYSTEM

Title:

Cryo EM structure of Hendra G ectodomain in complex with Ephrin-B2 and Fab HENV-270

Biological Source:

Source Organism(s):

Henipavirus hendraense (Taxon ID: 3052223)
Homo sapiens (Taxon ID: 9606)

Expression System(s):

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.90 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Glycoprotein
Gene (Uniprot):G
Chain IDs:A
Chain Length:429
Number of Molecules:1
Biological Source:Henipavirus hendraense

UniProt ID:F4YH71 Pfam ID:PF00423

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ephrin-B2
Gene (Uniprot):EFNB2
Chain IDs:B
Chain Length:138
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P52799 Pfam ID:PF00812

Polymer Type:polypeptide(L)
Molecule:Fan HENV-270 heavy chain
Chain IDs:C (auth: H)
Chain Length:120
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:Fan HENV-270 light chain
Chain IDs:D (auth: L)
Chain Length:108
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules