ISDA

Entry Detail

PDB ID:

9DU2

Keywords:

VIRAL PROTEIN, HYDROLASE/INHIBITOR

Title:

SARS-CoV-2 Mpro in complex with compound 7

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2

Host Organism:

Escherichia coli

PDB Version:

Deposition Date:

2024-10-02

Release Date:

2025-04-30

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.86 Å

R-Value Free:

0.20

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:3C-like proteinase nsp5
Chain IDs:A, B
Chain Length:315
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTD1 Pfam ID:PF05409 EC:2.7.7.48

Ligand Molecules

A1BCY

Primary Citation

Inhibition of Dimeric SARS-CoV-2 Mpro by Aldehyde and Nitrilebased Inhibitors Displays Positive Cooperativity and a Mixture of Covalent and Non-covalent Binding.

Padmanabha Das, K.M, Chen, J, Charifson, P.S, Green, J, Tang, H, Panchal, S, Pu, F, Korepanova, A, Afanador, G, Stojkovic, V, Nocek, B, Bigelow, L, Stubbs, S, Davey, R.A, DeGoey, D.A, Arthanari, H, Namchuk, M.N.Show

To Be Published ? ? ? (?)

Primary Citation of related structures