9DQW image
Deposition Date 2024-09-24
Release Date 2024-10-09
Last Version Date 2024-10-09
Entry Detail
PDB ID:
9DQW
Keywords:
LIGASE
Title:
Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and AMP-PNP
Biological Source:
Source Organism:
Escherichia coli K-12 (Taxon ID: 83333)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.45 Å
R-Value Free:
0.16
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
P 41
9DQW validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UDP-N-acetylmuramoylalanine--D-glutamate ligase
Gene (Uniprot):murD
Chain IDs:A
Chain Length:445
Number of Molecules:1
Biological Source:Escherichia coli K-12
UniProt ID:P14900 Pfam ID:PF21799, PF08245, PF02875 EC:6.3.2.9
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KCX A LYS modified residue
Ligand Molecules
ANP
CL
EPE
GOL
MG
SO4
UMA
Primary Citation
Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and AMP-PNP
To be published ? ? ? (?)
Primary Citation of related structures
9DQW