9DQB image
Deposition Date 2024-09-23
Release Date 2025-10-01
Last Version Date 2025-10-01
Entry Detail
PDB ID:
9DQB
Keywords:
LIGASE
Title:
Cryo-EM structure of a double-loaded SUMO E1-E2-SUMO1 complex.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9DQB validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SUMO-activating enzyme subunit 1
Gene (Uniprot):SAE1
Chain IDs:D (auth: A)
Chain Length:366
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q9UBE0 Pfam ID:PF00899
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SUMO-activating enzyme subunit 2
Gene (Uniprot):UBA2
Chain IDs:E (auth: B)
Chain Length:548
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q9UBT2 Pfam ID:PF00899, PF14732
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SUMO-conjugating enzyme UBC9
Gene (Uniprot):UBE2I
Mutagens:F22A,G23Q,V25S,A129K,C138S,K153R
Chain IDs:A (auth: C)
Chain Length:178
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P63279 Pfam ID:PF00179 EC:2.3.2.23
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ubiquitin-related modifier 1
Gene (Uniprot):SUMO1
Chain IDs:B (auth: D)
Chain Length:117
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P63165 Pfam ID:PF11976
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ubiquitin-related modifier 1
Gene (Uniprot):SUMO1
Mutagens:C52A
Chain IDs:C (auth: G)
Chain Length:117
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P63165 Pfam ID:PF11976
Ligand Molecules
AMP
ZN
Primary Citation
Cryo-EM structure of a double-loaded SUMO E1-E2-SUMO1 complex.
To Be Published ? ? ? (?)
Primary Citation of related structures
9DQB