9DM9 image
Deposition Date 2024-09-12
Release Date 2025-09-17
Last Version Date 2025-09-17
Entry Detail
PDB ID:
9DM9
Keywords:
TRANSFERASE/DNA
Title:
HIV-RT pre-catalytic complex with MK-8527
Biological Source:
Source Organism:
HIV-1 M:B_HXB2R (Taxon ID: 11706)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.73 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 2 2 21
9DM9 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Reverse transcriptase/ribonuclease H
Gene (Uniprot):gag-pol
Mutagens:Q258C,C280S
Chain IDs:A
Chain Length:562
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:p51 RT
Gene (Uniprot):gag-pol
Mutagens:C280S
Chain IDs:B
Chain Length:455
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075
Polymer Type:polydeoxyribonucleotide
Molecule:DNA Primer
Chain IDs:C (auth: P)
Chain Length:21
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA Template
Chain IDs:D (auth: T)
Chain Length:27
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
A1A6R
MG
Primary Citation
Discovery of MK-8527, a novel long-acting nucleoside reverse transcriptase translocation inhibitor of HIV replication
To Be Published ? ? ? (?)
Primary Citation of related structures
9DM9