9DD9 image
Deposition Date 2024-08-27
Release Date 2025-09-10
Last Version Date 2025-09-10
Entry Detail
PDB ID:
9DD9
Keywords:
VIRAL PROTEIN
Title:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Biological Source:
Source Organism:
Human alphaherpesvirus 1 (Taxon ID: 10298)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.77 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9DD9 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glycoprotein B
Gene (Uniprot):UL27
Mutagens:H516P,L531E
Chain IDs:A, B, C
Chain Length:808
Number of Molecules:3
Biological Source:Human alphaherpesvirus 1
UniProt ID:A1Z0P7 Pfam ID:PF17416, PF17417, PF00606
Polymer Type:polypeptide(L)
Molecule:D48 heavy chain
Chain IDs:D (auth: H), E (auth: I), F (auth: J)
Chain Length:123
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:D48 light chain
Chain IDs:G (auth: L), H (auth: M), I (auth: N)
Chain Length:107
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
Herpes simplex virus 1 evades prefusion gB neutralization
To Be Published ? ? ? (?)
Primary Citation of related structures
9DD9