9DD8 image
Deposition Date 2024-08-27
Release Date 2025-09-10
Last Version Date 2025-09-10
Entry Detail
PDB ID:
9DD8
Keywords:
VIRAL PROTEIN
Title:
Cryo-EM structure of neutralizing human antibody D48 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P
Biological Source:
Source Organism:
Human alphaherpesvirus 1 (Taxon ID: 10298)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.08 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9DD8 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glycoprotein B
Gene (Uniprot):UL27
Mutagens:H516P
Chain IDs:A, D (auth: B), G (auth: C)
Chain Length:808
Number of Molecules:3
Biological Source:Human alphaherpesvirus 1
UniProt ID:A1Z0P7 Pfam ID:PF17416, PF17417, PF00606
Polymer Type:polypeptide(L)
Molecule:D48 heavy chain
Chain IDs:B (auth: H), E (auth: I), H (auth: J)
Chain Length:238
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:D48 light chain
Chain IDs:C (auth: L), F (auth: M), I (auth: N)
Chain Length:214
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
Prefusion structure and neutralization of HSV-1 glycoprotein B
To Be Published ? ? ? (?)
Primary Citation of related structures
9DD8