9D96 image
Deposition Date 2024-08-21
Release Date 2025-09-03
Last Version Date 2025-09-03
Entry Detail
PDB ID:
9D96
Keywords:
IMMUNE SYSTEM
Title:
KIR3DL1 - HLA-B38-YHL complex
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
human gammaherpesvirus 4 (Taxon ID: 10376)
Expression System(s):
Escherichia coli, Synthetic construct, Homo sapiens
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.40 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
9D96 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):HLA-B
Chain IDs:A
Chain Length:276
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:E5FQ58 Pfam ID:PF00129, PF07654
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P61769 Pfam ID:PF07654
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Epstein-Barr nuclear antigen 2
Gene (Uniprot):EBNA2
Chain IDs:C
Chain Length:10
Number of Molecules:1
Biological Source:human gammaherpesvirus 4
UniProt ID:P12978
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Killer cell immunoglobulin-like receptor 3DL1
Gene (Uniprot):KIR3DL1
Chain IDs:D (auth: G)
Chain Length:301
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P43629 Pfam ID:PF00047
Ligand Molecules
NAG
Primary Citation
The ancient MHC class I molecule HLA-B*38:01 calibrates the immune system to protect against multiple sclerosis
To Be Published ? ? ? (?)
Primary Citation of related structures
9D95
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