9D74 image
Deposition Date 2024-08-16
Release Date 2026-02-11
Last Version Date 2026-02-11
Entry Detail
PDB ID:
9D74
Keywords:
Title:
CryoEM structure of anti-MHC-I Fab B1.23.2 complex with HLA-B44:05
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.31 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HLA class I histocompatibility antigen B alpha chain (HLA-B*44:05)
Gene (Uniprot):HLA-B
Chain IDs:A
Chain Length:274
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:B1.23.2 Fab Heavy Chain: CH and CH1 domains
Chain IDs:C (auth: H)
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:B1.23.2 Fab Light Chain: VL and C kappa domains
Chain IDs:D (auth: L)
Chain Length:213
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class II antigen peptide
Gene (Uniprot):HLA-DPA1
Chain IDs:E (auth: P)
Chain Length:9
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Structural mechanism of anti-MHC-I antibody blocking of inhibitory NK cell receptors in tumor immunity.
Commun Biol ? ? ? (2026)
PMID: 41629525 DOI: 10.1038/s42003-026-09641-8

Abstact

Anti-major histocompatibility complex class I (MHC-I) mAbs can stimulate immune responses to tumors and infections by blocking suppressive signals delivered via various immune inhibitory receptors. To understand such functions, we determined the structure of a highly cross-reactive anti-human MHC-I mAb, B1.23.2, in complex with the MHC-I molecule HLA-B*44:05 by both cryo-electron microscopy (cryo-EM) and X-ray crystallography. Structural models determined by the two methods were essentially identical revealing that B1.23.2 binds a conserved region on the α21 helix that overlaps the killer immunoglobulin-like receptor (KIR) binding site. Structural comparison to KIR/HLA complexes reveals a mechanism by which B1.23.2 blocks inhibitory receptor interactions, leading to natural killer (NK) cell activation. B1.23.2 treatment of the human KLM-1 pancreatic cancer model in humanized (NSG-IL15) mice provides evidence of suppression of tumor growth. Such anti-MHC-I mAb that block inhibitory KIR/HLA interactions may prove useful for tumor immunotherapy.

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Chemical

Disease

Primary Citation of related structures
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