ISDA: 9D6V

Deposition Date 2024-08-15

Release Date 2025-08-20

Last Version Date 2025-08-20

Entry Detail

PDB ID:

9D6V

Keywords:

DNA

Title:

[F:Au+/Ag+:F-pH8] Heterobimetallic base pair with Ag+ and Au+ between a 2-thio-dT homopair, crystallized in the presence of Ag+, Au+ and Cu+

Biological Source:

Source Organism:

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

4.87 Å

R-Value Free:

0.26

R-Value Work:

0.23

R-Value Observed:

0.24

Space Group:

H 3

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Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA
Chain IDs:A
Chain Length:21
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA
Chain IDs:B
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*GP*CP*TP*GP*CP*T)-3')
Chain IDs:C
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3')
Chain IDs:D
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Thiothymidine metal base pairs

Vecchioni, S, Imstepf, L, Lu, B, Woloszyn, K, Sha, R, Ohayon, Y.P.Show

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Primary Citation of related structures

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