ISDA: 9D4U

Deposition Date 2024-08-13

Release Date 2025-08-20

Last Version Date 2025-08-20

Entry Detail

PDB ID:

9D4U

Keywords:

HYDROLASE

Title:

Core particle assembly intermediate Capless 13S purified from Saccharomyces cerevisiae

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Host Organism:

Saccharomyces cerevisiae

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.55 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-1
Gene (Uniprot):SCL1
Chain IDs:A
Chain Length:252
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P21243 Pfam ID:PF10584, PF00227 EC:3.4.25.1

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-2
Gene (Uniprot):PRE8
Chain IDs:B
Chain Length:250
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P23639 Pfam ID:PF10584, PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-3
Gene (Uniprot):PRE9
Chain IDs:C
Chain Length:258
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P23638 Pfam ID:PF10584, PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-4
Gene (Uniprot):PRE6
Chain IDs:D
Chain Length:254
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P40303 Pfam ID:PF10584, PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-5
Gene (Uniprot):PUP2
Chain IDs:E
Chain Length:260
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P32379 Pfam ID:PF10584, PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-6
Gene (Uniprot):PRE5
Chain IDs:F
Chain Length:234
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P40302 Pfam ID:PF10584, PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Probable proteasome subunit alpha type-7
Gene (Uniprot):PRE10
Chain IDs:G
Chain Length:288
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P21242 Pfam ID:PF10584, PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-2
Gene (Uniprot):PUP1
Chain IDs:H (auth: I)
Chain Length:261
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P25043 Pfam ID:PF00227, PF12465

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-3
Gene (Uniprot):PUP3
Chain IDs:I (auth: J)
Chain Length:205
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P25451 Pfam ID:PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-4
Gene (Uniprot):PRE1
Chain IDs:J (auth: K)
Chain Length:198
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P22141 Pfam ID:PF00227

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome maturation factor UMP1
Gene (Uniprot):UMP1
Chain IDs:K (auth: P)
Chain Length:200
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:P38293 Pfam ID:PF05348

Ligand Molecules

Primary Citation

Structure of Blm10:13S proteasome assembly intermediate reveals parallel assembly pathways for the proteasome core particle

Kaur, M, Chen, X, Lee, S.Y, Weaver, T.M, Freudenthal, B.D, Walters, K.J, Roelofs, J.Show

To Be Published ? ? ? (?)

Primary Citation of related structures