9D2F image
Deposition Date 2024-08-08
Release Date 2025-08-13
Last Version Date 2025-08-13
Entry Detail
PDB ID:
9D2F
Keywords:
STRUCTURAL PROTEIN
Title:
3D structure and atomic model of RS3 of mouse respiratory cilia
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
4.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9D2F validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Adenylate kinase 9
Gene (Uniprot):Ak9
Chain IDs:A
Chain Length:1894
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:G3UYQ4 Pfam ID:PF00406
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Leucine-rich repeat-containing protein 23
Gene (Uniprot):Lrrc23
Chain IDs:B, C
Chain Length:340
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:O35125 Pfam ID:PF13516, PF14580
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Adenylate kinase 7
Gene (Uniprot):Ak7
Chain IDs:BA (auth: D), CA (auth: G)
Chain Length:723
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:F8WIC0 Pfam ID:PF00406, PF05186
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Malate dehydrogenase, cytoplasmic
Gene (Uniprot):Mdh1
Chain IDs:V (auth: E)
Chain Length:334
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P14152 Pfam ID:PF00056, PF02866
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Putative malate dehydrogenase 1B
Gene (Uniprot):Mdh1b
Chain IDs:W (auth: F)
Chain Length:500
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q5F204
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serine/threonine/tyrosine interacting-like 1
Gene (Uniprot):Styxl1
Chain IDs:D (auth: H)
Chain Length:321
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q9DAR2 Pfam ID:PF00782
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MORN repeat-containing protein 5
Gene (Uniprot):Morn5
Chain IDs:Q (auth: I)
Chain Length:170
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q9DAI9 Pfam ID:PF02493
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cilia- and flagella-associated protein 61
Gene (Uniprot):Cfap61
Chain IDs:R (auth: J)
Chain Length:1252
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q8CEL2 Pfam ID:PF16092
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cilia- and flagella-associated protein 251
Gene (Uniprot):Cfap251
Chain IDs:S (auth: K)
Chain Length:1299
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:E9Q743 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tetratricopeptide repeat protein 29
Gene (Uniprot):Ttc29
Chain IDs:T (auth: L)
Chain Length:471
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:E9QLU4 Pfam ID:PF13424
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Zinc finger, MYND domain containing 12
Gene (Uniprot):Zmynd12
Chain IDs:U (auth: M)
Chain Length:363
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:A2BGJ5 Pfam ID:PF01753
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cilia- and flagella-associated protein 91
Gene (Uniprot):Cfap91
Chain IDs:E (auth: N)
Chain Length:783
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q8BRC6 Pfam ID:PF14738
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Actin, aortic smooth muscle
Gene (Uniprot):Acta2
Chain IDs:F (auth: O), I (auth: R)
Chain Length:377
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:P62737 Pfam ID:PF00022
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Axonemal dynein light intermediate polypeptide 1
Gene (Uniprot):Dnali1
Chain IDs:G (auth: P), H (auth: Q)
Chain Length:258
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:Q8BVN8 Pfam ID:PF10211
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centrin-2
Gene (Uniprot):Cetn2
Chain IDs:J (auth: S)
Chain Length:172
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q9R1K9 Pfam ID:PF13499
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein, axonemal, heavy chain 6
Gene (Uniprot):Dnah6
Chain IDs:P (auth: T)
Chain Length:4144
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:E9Q0B6 Pfam ID:PF08393, PF12774, PF17852, PF12775, PF17857, PF12780, PF12777, PF12781, PF03028, PF18198, PF18199
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein axonemal heavy chain 1
Gene (Uniprot):Dnah1
Chain IDs:K (auth: U)
Chain Length:4250
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:E9Q8T7 Pfam ID:PF08393, PF12774, PF17852, PF12775, PF17857, PF12780, PF12777, PF12781, PF03028, PF18198, PF18199
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UPF0728 protein C10orf53 homolog
Chain IDs:X (auth: V)
Chain Length:93
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q3KNL4 Pfam ID:PF15092
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cilia- and flagella-associated protein 57
Gene (Uniprot):Cfap57
Chain IDs:L (auth: W), M (auth: X)
Chain Length:1249
Number of Molecules:2
Biological Source:Mus musculus
UniProt ID:Q9D180 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cilia- and flagella-associated protein 43
Gene (Uniprot):Cfap43
Chain IDs:N (auth: Y)
Chain Length:1682
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:E9Q7R9
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cilia- and flagella-associated protein 44
Gene (Uniprot):Cfap44
Chain IDs:O (auth: Z)
Chain Length:1843
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:E9Q5M6 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:A kinase (PRKA) anchor protein 14
Gene (Uniprot):Akap14
Chain IDs:Y (auth: a)
Chain Length:1894
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:Q3V0I7 Pfam ID:PF14469
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:cAMP-dependent protein kinase type II-alpha regulatory subunit
Gene (Uniprot):Prkar2a
Chain IDs:Z (auth: b)
Chain Length:340
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:P12367 Pfam ID:PF02197, PF00027
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ciliogenesis-associated TTC17-interacting protein
Gene (Uniprot):Catip
Chain IDs:AA (auth: c)
Chain Length:520
Number of Molecules:1
Biological Source:Mus musculus
UniProt ID:B9EKE5 Pfam ID:PF21772
Ligand Molecules
ZN
Primary Citation
The cryo-EM structure of mouse radial spoke 3 reveals a unique metabolic and regulatory hub in cilia
To Be Published ? ? ? (?)
Primary Citation of related structures
9D2F