9CX4 image
Deposition Date 2024-07-30
Release Date 2024-10-16
Last Version Date 2024-11-27
Entry Detail
PDB ID:
9CX4
Title:
Acinetobacter baumannii BamA POTRAs 1-4, space group P1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.78 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Outer membrane protein assembly factor BamA
Chain IDs:A, B
Chain Length:328
Number of Molecules:2
Biological Source:Acinetobacter baumannii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
Structural characterization of the POTRA domains from A. baumannii reveals new conformations in BamA.
Structure 32 2038 ? (2024)
PMID: 39293443 DOI: 10.1016/j.str.2024.08.013

Abstact

Recent studies have demonstrated BamA, the central component of the β-barrel assembly machinery (BAM), as an important therapeutic target to combat infections caused by Acinetobacter baumannii and other Gram-negative pathogens. Homology modeling indicates BamA in A. baumannii consists of five polypeptide transport-associated (POTRA) domains and a β-barrel membrane domain. We characterized the POTRA domains of BamA from A. baumannii in solution using size-exclusion chromatography small angle X-ray scattering (SEC-SAXS) analysis and determined crystal structures in two conformational states that are drastically different than those previously observed in BamA from other bacteria, indicating that the POTRA domains are even more conformationally dynamic than has been observed previously. Molecular dynamics simulations of the POTRA domains from A. baumannii and Escherichia coli allowed us to identify key structural features that contribute to the observed novel states. Together, these studies expand on our current understanding of the conformational plasticity within BamA across differing bacterial species.

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Primary Citation of related structures