9CPZ image
Deposition Date 2024-07-18
Release Date 2025-08-06
Last Version Date 2025-08-06
Entry Detail
PDB ID:
9CPZ
Keywords:
LYASE
Title:
C387S variant of D-ornithine/D-lysine decarboxylase complexed with PMP and 4-guanidinobutanal
Biological Source:
Source Organism:
Salmonella enterica subsp. enterica serovar Typhimurium (Taxon ID: 90371)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.54 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 1 2 1
9CPZ validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-ornithine/D-lysine decarboxylase
Gene (Uniprot):dokD
Mutagens:C387S
Chain IDs:A, B
Chain Length:478
Number of Molecules:2
Biological Source:Salmonella enterica subsp. enterica serovar Typhimurium
UniProt ID:Q8ZNC4 Pfam ID:PF00278, PF02784 EC:4.1.1.116
Ligand Molecules
A1AZK
ACT
CL
DMS
NA
PMP
Primary Citation
Structure of C387S DOKDC soaked with D-Arg
To Be Published ? ? ? (?)
Primary Citation of related structures
9CPZ