9CNU image
Entry Detail
PDB ID:
9CNU
EMDB ID:
Keywords:
Title:
HIV-2 CA hexamer bound with Nup153 peptide; assembled with liposome templating
Biological Source:
PDB Version:
Deposition Date:
2024-07-15
Release Date:
2025-03-05
Method Details:
Experimental Method:
Resolution:
2.99 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Capsid protein p24
Chain IDs:A
Chain Length:240
Number of Molecules:1
Biological Source:Human immunodeficiency virus 2
Polymer Type:polypeptide(L)
Description:Nuclear pore complex protein Nup153
Mutations:Delta(1-1410) and Delta(1426-1463)
Chain IDs:B
Chain Length:27
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural insights into HIV-2 CA lattice formation and FG-pocket binding revealed by single-particle cryo-EM.
Cell Rep 44 115245 115245 (2025)
PMID: 39864060 DOI: 10.1016/j.celrep.2025.115245

Abstact

One of the striking features of human immunodeficiency virus (HIV) is the capsid, a fullerene cone comprised of pleomorphic capsid protein (CA) that shields the viral genome and recruits cofactors. Despite significant advances in understanding the mechanisms of HIV-1 CA assembly and host factor interactions, HIV-2 CA assembly remains poorly understood. By templating the assembly of HIV-2 CA on functionalized liposomes, we report high-resolution structures of the HIV-2 CA lattice, including both CA hexamers and pentamers, alone and with peptides of host phenylalanine-glycine (FG)-motif proteins Nup153 and CPSF6. While the overall fold and mode of FG-peptide binding is conserved with HIV-1, this study reveals distinctive features of the HIV-2 CA lattice, including differing structural character at regions of host factor interactions and divergence in the mechanism of formation of CA hexamers and pentamers. This study extends our understanding of HIV capsids and highlights an approach facilitating the study of lentiviral capsid biology.

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Primary Citation of related structures