9CMV image
Deposition Date 2024-07-15
Release Date 2025-07-23
Last Version Date 2025-08-06
Entry Detail
PDB ID:
9CMV
Keywords:
Title:
Crystal structure of the KRAS-p110alpha complex in the presence of molecular glue D223
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.01 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Gene (Uniprot):PIK3CA
Mutagens:W1057A/I1058A/F1059A
Chain IDs:A
Chain Length:965
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:GTPase KRas
Gene (Uniprot):KRAS
Chain IDs:B
Chain Length:170
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Molecular glues that facilitate RAS binding to PI3K alpha promote glucose uptake without insulin.
Science 389 402 408 (2025)
PMID: 40705882 DOI: 10.1126/science.adr9097

Abstact

While exploring strategies to control blood glucose concentrations in diabetes, we identified so-called molecular glues D223 and D927 that promote glucose uptake in the absence of insulin. They act by increasing the binding affinity of phosphoinositide 3-kinase α (PI3Kα) catalytic subunit p110α to canonical small guanosine triphosphatase RAS proteins and to RRAS, RRAS2, and MRAS by three orders of magnitude. The compounds bind to the RAS-binding domain of p110α, stabilizing the secondary structures of the PI3Kα in a RAS-binding conformation and forming direct interactions with RAS residues tyrosine-40 and arginine-41. In vivo, D927 mimicked the effects of insulin: It rapidly lowered blood glucose concentrations, enhanced glucose metabolism in normal and Zucker fatty rats, and improved hyperglycemia in models of type 1 and type 2 diabetes, even in insulin-deficient diabetic animals.

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Primary Citation of related structures
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