ISDA

Deposition Date 2024-07-15

Release Date 2025-05-28

Last Version Date 2025-05-28

Entry Detail

PDB ID:

9CMR

Keywords:

LIGASE

Title:

Saccharomyces cerevisiae Tom1 HECT domain

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.30 Å

R-Value Free:

0.25

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

F 41 3 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase TOM1
Gene (Uniprot):TOM1
Chain IDs:A
Chain Length:412
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q03280 Pfam ID:PF00632 EC:2.3.2.26

Ligand Molecules

SO4

Primary Citation

Tom1p ubiquitin ligase structure, interaction with Spt6p, and function in maintaining normal transcript levels and the stability of chromatin in promoters.

Madrigal, J, Schubert, H.L, Sdano, M.A, McCullough, L, Connell, Z, Formosa, T, Hill, C.P, Liebschner, D, Afonine, P.V, Baker, M.L, Bunkoczi, G, Chen, V.B, Croll, T.I, Hintze, B, Hung, L.W, Jain, S, McCoy, A.J, Moriarty, N.W, Oeffner, R.D, Poon, B.K, Prisant, M.G, Read, R.J, Richardson, J.S, Richardson, D.C, Sammito, M.D, Sobolev, O.V, Stockwell, D.H, Terwilliger, T.C, Urzhumtsev, A.G, Videau, L.L, Williams, C.J, Adams, P.D.Show

To Be Published ? ? ? (?)

Primary Citation of related structures