ISDA

Deposition Date 2024-07-08

Release Date 2025-07-30

Last Version Date 2025-07-30

Entry Detail

PDB ID:

9CKH

Keywords:

DNA

Title:

[d2d3-2Ag] Tensegrity triangle with deazapurines on the helical and center strands with two deazaA:Ag+:T base pairs

Biological Source:

Source Organism:

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

5.92 Å

R-Value Free:

0.17

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 63

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Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*AP*(7GU)P*CP*(7DA)P*(7GU)P*CP*CP*TP*(7GU)P*TP*(7DA)P*CP*(7GU)P*(7GU)P*(7DA)P*CP*(7DA)P*TP*CP*(7DA))-3')
Chain IDs:A
Chain Length:21
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*CP*(7GU)P*TP*(7DA)P*CP*(7DA))-3')
Chain IDs:B
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*GP*CP*TP*GP*C)-3')
Chain IDs:C
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*T)-3')
Chain IDs:D
Chain Length:8
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Deazapurine metal-mediated nanostructures

Lopez Chamorro, C, Jong, M.A.Show

To Be Published ? ? ? (?)

Primary Citation of related structures