9CJY image
Deposition Date 2024-07-08
Release Date 2025-07-09
Last Version Date 2025-07-09
Entry Detail
PDB ID:
9CJY
Keywords:
Title:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1 chain
Gene (Uniprot):HA
Chain IDs:A, C, E
Chain Length:326
Number of Molecules:3
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA2 chain
Gene (Uniprot):HA
Chain IDs:B, D, F
Chain Length:222
Number of Molecules:3
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:3-C07 Heavy chain
Chain IDs:G, H, J
Chain Length:122
Number of Molecules:3
Biological Source:Macaca fascicularis
Polymer Type:polypeptide(L)
Molecule:3-C07 Light chain
Chain IDs:I, K, L
Chain Length:106
Number of Molecules:3
Biological Source:Macaca fascicularis
Ligand Molecules
Primary Citation

Abstact

UNLABELLED Human B cell immunity to the influenza hemagglutinin (HA) stem region, a universal influenza vaccine target, is often stereotyped and immunogenetically restricted, posing challenges for study outside humans. Here, we show that macaques vaccinated with a HA stem immunogen elicit human-like public B cell lineages targeting two major conserved sites of vulnerability, the central stem and anchor epitopes. Central stem antibodies were predominantly derived from V H 1-138, the macaque homolog of human V H 1-69, a V H -gene preferentially used in human central stem broadly neutralizing antibodies (bnAbs). Similarly, macaques produced anchor bnAbs with the human-like NWP motif. Both bnAb lineages were functionally and structurally analogous to their human counterparts, with recognition mediated largely by germline-encoded motifs. Thus the macaque immunoglobulin repertoire supports human-like public bnAb responses to influenza HA. Moreover, this underscores the utility of homologous germline-encoded immunity, suggesting that immune repertoires of macaques and humans may have been similarly shaped during evolution. HIGHLIGHTS Functional human-like public antibody lineages can be elicited to HA stem supersites in macaques. Macaque central stem bnAbs are predominantly derived from V H 1-138, a V H -gene homologous to human V H 1-69. The human-like CDR L3 NWP anchor epitope-targeting lineage can be elicited in macaques.Central stem and anchor bnAbs from humans and macaques engage their respective epitopes with atomic level similarity.

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Primary Citation of related structures