9CJG image
Entry Detail
PDB ID:
9CJG
Keywords:
Title:
P450-G9 from Actinokineospora terrae, a non-canonical, serine-ligated cytochrome P450 in the ligand-free, closed conformation
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2024-07-06
Release Date:
2025-03-12
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cytochrome P450-G9
Chain IDs:A, B
Chain Length:411
Number of Molecules:2
Biological Source:Actinokineospora terrae
Primary Citation
Non-Canonical Cytochrome P450 Enzymes in Nature.
Biorxiv ? ? ? (2024)
PMID: 39763895 DOI: 10.1101/2024.12.22.630014

Abstact

Cytochrome P450s (CYPs) are a superfamily of thiolate-ligated heme metalloenzymes principally responsible for the hydroxylation of unactivated C-H bonds. The lower-axial cysteine is an obligatory and universally conserved residue for the CYP enzyme class. Herein, we challenge this paradigm by systematically identifying non-canonical CYPs (ncCYPs) that do not harbor a cysteine ligand. Our bioinformatic search reveals 20 distinct ncCYP families with diverse ligands encoded in microbial genomes. We characterize a native serine-ligated CYP with a high-spin ferric resting state. Its crystal structure clearly shows a typical CYP fold and a serine alkoxide as a lower axial heme ligand. In addition, we report the discovery and characterization of the first native selenocysteine-ligated CYP in nature. Our findings radically expand the CYP metalloenzyme family.

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