ISDA: 9CD3

Deposition Date 2024-06-24

Release Date 2025-08-06

Last Version Date 2025-08-06

Entry Detail

PDB ID:

9CD3

Keywords:

LYASE

Title:

Cryo-EM structure of Candidatus Saccharibacterium phosphoketolase complexed with thiamine diphosphate

Biological Source:

Source Organism:

Candidatus Saccharibacteria bacterium (Taxon ID: 2026720)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.18 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Phosphoketolase family protein
Gene (Uniprot):HG452_002440
Chain IDs:A, B
Chain Length:799
Number of Molecules:2
Biological Source:Candidatus Saccharibacteria bacterium

UniProt ID:A0A7W4E7R7 Pfam ID:PF09364, PF03894, PF09363

Ligand Molecules

TPP

Primary Citation

A synthetic pathway for cell-free upgrading of one-carbon substrates

Landwehr, G.M, Vogeli, B, Tian, C, Singal, B, Gupta, A, Lion, R, Sargent, E.H, Karim, A.S, Jewett, M.C, Liebschner, D, Afonine, P.V, Baker, M.L, Bunkoczi, G, Chen, V.B, Croll, T.I, Hintze, B, Hung, L.W, Jain, S, McCoy, A.J, Moriarty, N.W, Oeffner, R.D, Poon, B.K, Prisant, M.G, Read, R.J, Richardson, J.S, Richardson, D.C, Sammito, M.D, Sobolev, O.V, Stockwell, D.H, Terwilliger, T.C, Urzhumtsev, A.G, Videau, L.L, Williams, C.J, Adams, P.D.Show

To Be Published ? ? ? (?)

Primary Citation of related structures