9CCG image
Deposition Date 2024-06-21
Release Date 2025-09-17
Last Version Date 2025-11-19
Entry Detail
PDB ID:
9CCG
Title:
Fusobacterium nucleatum BamA-Fab 9 complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.87 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:POTRA domain-containing protein
Gene (Uniprot):RO03_10440
Chain IDs:A, D
Chain Length:675
Number of Molecules:2
Biological Source:Fusobacterium nucleatum
Polymer Type:polypeptide(L)
Molecule:Fab 9 heavy chain
Chain IDs:B, F
Chain Length:227
Number of Molecules:2
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:Fab 9 light chain
Chain IDs:C, E
Chain Length:212
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Characterization of the OMP biogenesis machinery in Fusobacterium nucleatum.
Structure 33 1878 ? (2025)
PMID: 40897170 DOI: 10.1016/j.str.2025.08.008

Abstact

F. nucleatum is a Gram-negative bacteria that causes oral infections and is linked to colorectal cancer. Pathogenicity relies on a type of β-barrel outer membrane protein (OMP) called an autotransporter. The biogenesis of OMPs is typically mediated by the barrel assembly machinery (BAM) complex. In this study, we investigate the evolution, composition, and structure of the OMP biogenesis machinery in F. nucleatum. Our bioinformatics and proteomics analyses indicate that OMP biogenesis in F. nucleatum is mediated solely by the core component BamA. The structure of FnBamA highlights distinct features, including four POTRA domains and a C-terminal 16-stranded β-barrel domain observed as an inverted dimer. FnBamA represents the original composition of the assembly machinery, and a duplication event that resulted in BamA and TamA occurred after the split of other lineages, including the Proteobacteria, from the Fusobacteria. FnBamA, therefore, likely serves a singular role in the biogenesis of all OMPs.

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Primary Citation of related structures
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