9C7Y image
Entry Detail
PDB ID:
9C7Y
EMDB ID:
Title:
Structure Of Respiratory Syncytial Virus Polymerase in complex with JNJ-2729
Biological Source:
PDB Version:
Deposition Date:
2024-06-11
Release Date:
2025-01-08
Method Details:
Experimental Method:
Resolution:
3.24 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:RNA-directed RNA polymerase L
Chain IDs:A
Chain Length:2201
Number of Molecules:1
Biological Source:Human respiratory syncytial virus A2
Polymer Type:polypeptide(L)
Description:Phosphoprotein
Chain IDs:B, C, D, E
Chain Length:256
Number of Molecules:4
Biological Source:Human respiratory syncytial virus A2
Ligand Molecules
Primary Citation
Structure-Activity Relationship of Oxacyclo- and Triazolo-Containing Respiratory Syncytial Virus Polymerase Inhibitors.
Acs Med.Chem.Lett. 15 1549 1558 (2024)
PMID: 39291020 DOI: 10.1021/acsmedchemlett.4c00272

Abstact

Despite the availability of medicines preventing respiratory syncytial virus (RSV) infection, post-exposure treatment options are needed for addressing patient's needs. RSV non-nucleoside polymerase inhibitors (NNI) have emerged as a promising asset for which our group previously disclosed JNJ-8003 with potent in vitro antiviral activity and pronounced in vivo efficacy. In this work, a structural-guided design to modify the linker vector of JNJ-8003 resulted in the identification of 2-oxacyclo pyridine-containing derivatives whose various ring closing strategies are described. In addition, bioisosteric replacement of an amide bond with triazole retained potency, and cryo-electron microscopy (cryo-EM) confirmed binding in the capping domain. Subsequent NMR conformational analysis suggested a correlation between the potency and conformations. Our efforts have fulfilled the aim of identifying linker modifications with maintained biological activity while enriching structural diversity and allowing modulations of other parameters.

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Primary Citation of related structures