9C29 image
Deposition Date 2024-05-30
Release Date 2025-06-25
Last Version Date 2025-06-25
Entry Detail
PDB ID:
9C29
Keywords:
VIRAL PROTEIN/DNA
Title:
Hexadecamer of NL4-3 WT HIV-1 intasome
Biological Source:
Source Organism:
HIV-1 06TG.HT008 (Taxon ID: 587638)
Host Organism:
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
8.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9C29 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrase
Gene (Uniprot):gag-pol
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
Chain Length:288
Number of Molecules:16
Biological Source:HIV-1 06TG.HT008
UniProt ID:P12497 Pfam ID:PF02022, PF00665, PF00552
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*CP*TP*GP*CP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*CP*CP*CP*G)-3')
Chain IDs:Q, S
Chain Length:19
Number of Molecules:2
Biological Source:HIV-1 06TG.HT008
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*GP*GP*GP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*GP*CP*A)-3')
Chain IDs:R, T
Chain Length:17
Number of Molecules:2
Biological Source:HIV-1 06TG.HT008
Ligand Molecules
MG
Primary Citation
Oligomeric HIV-1 Integrase Structures Reveal Functional Plasticity for Intasome Assembly and RNA Binding
Biorxiv ? ? ? (2025)
DOI: 10.1101/2024.01.26.577436
Primary Citation of related structures
9C29