ISDA

Entry Detail

PDB ID:

9C1J

EMDB ID:

EMD-45121

Keywords:

VIRAL PROTEIN

Title:

Rhesus rotavirus (reversed structure at 2.72 Angstrom resolution)

Biological Source:

Source Organism:

Simian rotavirus A strain RRV

Host Organism:

Simian rotavirus A strain RRV

PDB Version:

Deposition Date:

2024-05-29

Release Date:

2025-04-30

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.72 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Outer capsid glycoprotein VP7
Chain IDs:A (auth: 0), B (auth: 1), U (auth: P), V (auth: Q), W (auth: R), X (auth: S), Y (auth: T), Z (auth: U), AA (auth: V), BA (auth: W), CA (auth: X), DA (auth: Y), EA (auth: Z), LA (auth: t), MA (auth: u), NA (auth: v), OA (auth: w), PA (auth: x), QA (auth: y)
Chain Length:326
Number of Molecules:19
Biological Source:Simian rotavirus A strain RRV

UniProt ID:P12476 Pfam ID:PF00434

Protein Blast

Polymer Type:polypeptide(L)
Description:Outer capsid protein VP4
Chain IDs:C (auth: 2), D (auth: 3), E (auth: 4)
Chain Length:776
Number of Molecules:3
Biological Source:Simian rotavirus A strain RRV

UniProt ID:P12473 Pfam ID:PF00426, PF17477, PF17478

Protein Blast

Polymer Type:polypeptide(L)
Description:Inner capsid protein VP2
Chain IDs:F (auth: A), G (auth: B)
Chain Length:887
Number of Molecules:2
Biological Source:Simian rotavirus A strain RRV

UniProt ID:B3F2X3 Pfam ID:PF05087

Protein Blast

Polymer Type:polypeptide(L)
Description:Intermediate capsid protein VP6
Chain IDs:H (auth: C), I (auth: D), J (auth: E), K (auth: F), L (auth: G), M (auth: H), N (auth: I), O (auth: J), P (auth: K), Q (auth: L), R (auth: M), S (auth: N), T (auth: O), FA (auth: f), GA (auth: g), HA (auth: h), IA (auth: i), JA (auth: j), KA (auth: k)
Chain Length:397
Number of Molecules:19
Biological Source:Simian rotavirus A strain RRV

UniProt ID:B2BN53 Pfam ID:PF00980

Modified Residue