9BYR image
Deposition Date 2024-05-24
Release Date 2025-06-11
Last Version Date 2025-06-11
Entry Detail
PDB ID:
9BYR
Keywords:
RECOMBINATION/DNA
Title:
Filamentous Epstein-Barr virus annealase BALF2 ssDNA-annealing complex
Biological Source:
Source Organism:
human gammaherpesvirus 4 (Taxon ID: 10376)
synthetic construct (Taxon ID: 32630)
Host Organism:
Spodoptera frugiperda
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
7.75 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
9BYR validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major DNA-binding protein
Gene (Uniprot):DBP
Chain IDs:A (auth: N), B (auth: M), D (auth: L), F (auth: O), H (auth: K), J (auth: P), L (auth: J), N (auth: Q), P (auth: I), R, T (auth: H), V (auth: S), X (auth: G), Z (auth: T), BA (auth: F), DA (auth: U), FA (auth: E), HA (auth: V), JA (auth: D), LA (auth: W), NA (auth: C), PA (auth: X), RA (auth: B), SA (auth: A)
Chain Length:1128
Number of Molecules:24
Biological Source:human gammaherpesvirus 4
UniProt ID:P03227 Pfam ID:PF00747
Polymer Type:polydeoxyribonucleotide
Molecule:DNA(5'-D(*AP*GP*CP*TP*CP*GP*AP*TP*TP*TP*TP*T)-3')
Chain IDs:E (auth: l), I (auth: k), M (auth: j), Q (auth: i), U (auth: h), Y (auth: g), CA (auth: f), GA (auth: e), KA (auth: d), OA (auth: c), TA (auth: b)
Chain Length:1128
Number of Molecules:11
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA(5'-D(*GP*CP*AP*GP*AP*AP*TP*CP*GP*CP*CP*C)-3')
Chain IDs:C (auth: n), G (auth: o), K (auth: p), O (auth: q), S (auth: r), W (auth: s), AA (auth: t), EA (auth: u), IA (auth: v), MA (auth: w), QA (auth: x)
Chain Length:12
Number of Molecules:11
Biological Source:synthetic construct
Ligand Molecules
ZN
Primary Citation
Structural determination of BALF2 annealing intermediate reveals the mechanism through which DNA annealing occurs
To Be Published ? ? ? (?)
Primary Citation of related structures
9BYQ
9BYP