9BWB image
Entry Detail
PDB ID:
9BWB
EMDB ID:
Title:
Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in a desensitized state
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2024-05-21
Release Date:
2024-11-13
Method Details:
Experimental Method:
Resolution:
2.21 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glycine receptor subunit alpha-3
Chain IDs:A, B, C, D, E
Chain Length:478
Number of Molecules:5
Biological Source:Homo sapiens
Primary Citation
Mechanisms underlying modulation of human GlyR alpha 3 by Zn 2+ and pH.
Sci Adv 10 eadr5920 eadr5920 (2024)
PMID: 39693447 DOI: 10.1126/sciadv.adr5920

Abstact

Glycine receptors (GlyRs) regulate motor control and pain processing in the central nervous system through inhibitory synaptic signaling. The subtype GlyRα3 expressed in nociceptive sensory neurons of the spinal dorsal horn is a key regulator of physiological pain perception. Disruption of spinal glycinergic inhibition is associated with chronic inflammatory pain states, making GlyRα3 an attractive target for pain treatment. GlyRα3 activity is modulated by numerous endogenous and exogenous ligands that consequently affect pain sensitization. To understand the mechanism of two such endogenous modulators, Zn2+ and protons, we have used cryo-electron microscopy to determine structures of full-length human GlyRα3 in various functional states. Whereas acidic pH reduces peak glycine response, Zn2+ displays biphasic modulation in a concentration-dependent manner. Our findings reveal the effector sites and also capture intermediate conformations in the gating cycle. Combined with molecular dynamics simulations and electrophysiology, this work provides important insights into GlyRα3 activation and regulation.

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