9BVU image
Deposition Date 2024-05-20
Release Date 2024-06-05
Last Version Date 2025-10-29
Entry Detail
PDB ID:
9BVU
Title:
NMR structure of TLP-2 in solution
Biological Source:
Source Organism:
Rana temporaria (Taxon ID: 8407)
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Temporin-1Tl
Chain IDs:A
Chain Length:15
Number of Molecules:1
Biological Source:Rana temporaria
Ligand Molecules
Primary Citation
Structure-Guided Temporin L Analogs Development to Inhibit the Main Protease of SARS-CoV‐2.
Acs Med.Chem.Lett. 16 1963 1970 (2025)
PMID: 41089481 DOI: 10.1021/acsmedchemlett.5c00370

Abstact

Peptide-based inhibitors exhibit considerable potential as antiviral agents targeting SARS-CoV-2. In this study, we designed analogs (TLP-1, TLP-2, and TLP-3) of Temporin L (TL) peptide with the specific objective of selectively interacting with and targeting the main protease (Mpro) of SARS-CoV-2. The synthesis and characterization of TLPs were employed using solid-phase peptide synthesis and LC-MS respectively. CD and solution NMR spectroscopy elucidated the overall structure of the TLPs relative to TL, revealing folded peptides where introduced mutations alter the peptide conformation for binding to Mpro. MD simulations highlighted improvements in TLP's stability and interactions with Mpro. FRET based protease activity assays provided evidence that TLPs exhibited enhanced inhibitory activity against Mpro. The results of our study reveal the promising prospects of TLPs as attractive candidates for in vivo investigations, thereby contributing to the progress of peptide-based therapeutic approaches targeting SARS-CoV-2.

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Primary Citation of related structures