9BUQ image
Deposition Date 2024-05-17
Release Date 2025-05-28
Last Version Date 2025-05-28
Entry Detail
PDB ID:
9BUQ
Keywords:
Title:
Single particle cryoEM structure of the Pf80S ribosome in the POST state (nrt with P- and E-site tRNA)
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L24
Gene (Uniprot):PF3D7_1309100
Chain IDs:ZB (auth: A0)
Chain Length:162
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):PF3D7_1460700
Chain IDs:LA (auth: A1)
Chain Length:146
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L28
Gene (Uniprot):PF3D7_1142500
Chain IDs:MA (auth: A2)
Chain Length:127
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35
Gene (Uniprot):PF3D7_1124900
Chain IDs:OB (auth: A3)
Chain Length:124
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L29
Gene (Uniprot):PF3D7_1460300
Chain IDs:NA (auth: A4)
Chain Length:67
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7
Gene (Uniprot):PF3D7_0307200
Chain IDs:PB (auth: A5)
Chain Length:257
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L30e
Gene (Uniprot):PF3D7_1019400
Chain IDs:OA (auth: A6)
Chain Length:108
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L31
Gene (Uniprot):PF3D7_0503800
Chain IDs:PA (auth: A7)
Chain Length:120
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L32
Gene (Uniprot):PF3D7_0903900
Chain IDs:RA (auth: A8)
Chain Length:131
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35ae
Gene (Uniprot):PF3D7_1142600
Chain IDs:SA (auth: A9)
Chain Length:140
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:28S ribosomal RNA
Chain IDs:HA (auth: AA)
Chain Length:3788
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:5S ribosomal RNA
Chain IDs:JA (auth: AB)
Chain Length:112
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:5.8S ribosomal RNA
Chain IDs:IA (auth: AC)
Chain Length:159
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L2
Gene (Uniprot):PF3D7_0516900
Chain IDs:QB (auth: AD)
Chain Length:260
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3
Gene (Uniprot):PF3D7_1027800
Chain IDs:RB (auth: AE)
Chain Length:386
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4
Gene (Uniprot):PF3D7_0507100
Chain IDs:SB (auth: AF)
Chain Length:128
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L11a
Gene (Uniprot):PF3D7_0719600
Chain IDs:TB (auth: AG)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6
Gene (Uniprot):PF3D7_1323100
Chain IDs:VB (auth: AH)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6
Gene (Uniprot):PF3D7_1338200
Chain IDs:BB (auth: AI)
Chain Length:104
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7a
Gene (Uniprot):PF3D7_1424400
Chain IDs:CB (auth: AJ)
Chain Length:283
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):PF3D7_1004000
Chain IDs:EB (auth: AK)
Chain Length:202
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):PF3D7_0814000
Chain IDs:KA (auth: AL)
Chain Length:215
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23, putative
Gene (Uniprot):PF3D7_1331800
Chain IDs:FB (auth: AM)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14
Gene (Uniprot):PF3D7_1431700
Chain IDs:QA (auth: AN)
Chain Length:165
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27a
Gene (Uniprot):PF3D7_0618300
Chain IDs:HB (auth: AO)
Chain Length:148
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L15
Gene (Uniprot):PF3D7_0415900
Chain IDs:YA (auth: AP)
Chain Length:205
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10
Gene (Uniprot):PF3D7_1414300
Chain IDs:IB (auth: AQ)
Chain Length:219
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L5
Gene (Uniprot):PF3D7_1424100
Chain IDs:JB (auth: AR)
Chain Length:294
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18-2
Gene (Uniprot):PF3D7_1341300
Chain IDs:GB (auth: AS)
Chain Length:187
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L19
Gene (Uniprot):PF3D7_0614500
Chain IDs:MB (auth: AT)
Chain Length:182
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18a
Gene (Uniprot):PF3D7_1341200
Chain IDs:UB (auth: AU)
Chain Length:184
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L21
Gene (Uniprot):PF3D7_1426000
Chain IDs:WB (auth: AV)
Chain Length:161
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L17
Gene (Uniprot):PF3D7_1351400
Chain IDs:KB (auth: AW)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L22
Gene (Uniprot):PF3D7_0821700
Chain IDs:YB (auth: AX)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23
Gene (Uniprot):PF3D7_1323400
Chain IDs:LB (auth: AY)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L26
Gene (Uniprot):PF3D7_0312800
Chain IDs:NB (auth: AZ)
Chain Length:126
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L34
Gene (Uniprot):PF3D7_0710600
Chain IDs:TA (auth: Aa)
Chain Length:3788
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):PF3D7_1109900
Chain IDs:UA (auth: Ab)
Chain Length:112
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L37
Gene (Uniprot):PF3D7_0706400
Chain IDs:DB (auth: Ac)
Chain Length:159
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L38
Gene (Uniprot):PF3D7_1130100
Chain IDs:VA (auth: Ad)
Chain Length:260
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):PF3D7_0611700
Chain IDs:WA (auth: Ae)
Chain Length:386
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-60S ribosomal protein L40
Gene (Uniprot):PF3D7_1365900
Chain IDs:XA (auth: Af)
Chain Length:128
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L41
Gene (Uniprot):PF3D7_1144300
Chain IDs:XB (auth: Ag)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL43
Gene (Uniprot):RPL37A
Chain IDs:ZA (auth: Ah)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL42
Gene (Uniprot):RPL44
Chain IDs:AB (auth: Ai)
Chain Length:104
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S24
Gene (Uniprot):PF3D7_0519400
Chain IDs:A (auth: S1)
Chain Length:133
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S25
Gene (Uniprot):PF3D7_1421200
Chain IDs:B (auth: S2)
Chain Length:105
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S26
Gene (Uniprot):PF3D7_0217800
Chain IDs:C (auth: S3)
Chain Length:107
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27
Gene (Uniprot):PF3D7_1308300
Chain IDs:D (auth: S4)
Chain Length:82
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28e
Gene (Uniprot):PF3D7_1461300
Chain IDs:E (auth: S5)
Chain Length:67
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S30
Gene (Uniprot):RPS30
Chain IDs:F (auth: S6)
Chain Length:58
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:E-site tRNA
Chain IDs:G (auth: S7)
Chain Length:74
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:P-site tRNA
Chain IDs:AC (auth: S9)
Chain Length:76
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:18S ribosomal RNA
Chain IDs:H (auth: SA)
Chain Length:2092
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3a
Gene (Uniprot):RPS3A
Chain IDs:I (auth: SB)
Chain Length:262
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein SA
Gene (Uniprot):RPS2
Chain IDs:J (auth: SC)
Chain Length:263
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3
Gene (Uniprot):PF3D7_1465900
Chain IDs:K (auth: SD)
Chain Length:221
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S9
Gene (Uniprot):PF3D7_0520000
Chain IDs:L (auth: SE)
Chain Length:189
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S4
Gene (Uniprot):PF3D7_1105400
Chain IDs:M (auth: SF)
Chain Length:261
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5
Gene (Uniprot):PF3D7_1447000
Chain IDs:N (auth: SG)
Chain Length:272
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S6
Gene (Uniprot):PF3D7_1342000
Chain IDs:O (auth: SH)
Chain Length:306
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5
Gene (Uniprot):PF3D7_0721600
Chain IDs:P (auth: SI)
Chain Length:195
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S7
Gene (Uniprot):PF3D7_1302800
Chain IDs:Q (auth: SJ)
Chain Length:194
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15A
Gene (Uniprot):PF3D7_0316800
Chain IDs:R (auth: SK)
Chain Length:130
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S8
Gene (Uniprot):PF3D7_1408600
Chain IDs:S (auth: SL)
Chain Length:218
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S16
Chain IDs:T (auth: SM)
Chain Length:144
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S20e
Gene (Uniprot):PF3D7_1003500
Chain IDs:U (auth: SN)
Chain Length:118
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S10
Gene (Uniprot):PF3D7_0719700
Chain IDs:V (auth: SO)
Chain Length:137
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11
Gene (Uniprot):PF3D7_0516200
Chain IDs:W (auth: SP)
Chain Length:151
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S23
Gene (Uniprot):PF3D7_0306900
Chain IDs:X (auth: SQ)
Chain Length:145
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S12
Gene (Uniprot):RPS12
Chain IDs:Y (auth: SR)
Chain Length:141
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S18
Gene (Uniprot):PF3D7_1126200
Chain IDs:Z (auth: SS)
Chain Length:156
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29
Gene (Uniprot):PF3D7_0705700
Chain IDs:AA (auth: ST)
Chain Length:54
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15
Gene (Uniprot):PF3D7_1358800
Chain IDs:BA (auth: SU)
Chain Length:151
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11
Gene (Uniprot):PF3D7_0317600
Chain IDs:CA (auth: SV)
Chain Length:161
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S17
Gene (Uniprot):PF3D7_1242700
Chain IDs:DA (auth: SW)
Chain Length:137
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):PF3D7_1317800
Chain IDs:EA (auth: SX)
Chain Length:145
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):PF3D7_0422400
Chain IDs:FA (auth: SY)
Chain Length:170
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S21
Gene (Uniprot):PF3D7_1144000
Chain IDs:GA (auth: SZ)
Chain Length:82
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:mRNA
Chain IDs:BC (auth: mR)
Chain Length:7
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Ligand Molecules
Primary Citation
Inhibition elongation factor binding to the malarial 80S ribosome triggers ribosome biogenesis
To Be Published ? ? ? (?)
Primary Citation of related structures