9BS6 image
Deposition Date 2024-05-13
Release Date 2025-05-28
Last Version Date 2025-05-28
Entry Detail
PDB ID:
9BS6
Keywords:
HYDROLASE/DNA/RNA
Title:
CryoEM structure of ThermoCas9 in post-cleavage state with a DNA containing NNNNCGA PAM
Biological Source:
Source Organism:
Geobacillus thermodenitrificans (Taxon ID: 33940)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9BS6 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CRISPR-associated endonuclease Cas9
Chain IDs:E (auth: A)
Chain Length:1082
Number of Molecules:1
Biological Source:Geobacillus thermodenitrificans
UniProt ID:A0A4R1QIZ8 Pfam ID:PF18470, PF13395, PF18541
Polymer Type:polyribonucleotide
Molecule:RNA (114-MER)
Chain IDs:F (auth: B)
Chain Length:149
Number of Molecules:1
Biological Source:Geobacillus thermodenitrificans
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (25-MER)
Chain IDs:A (auth: C)
Chain Length:26
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*TP*AP*TP*AP*CP*AP*CP*GP*AP*AP*GP*CP*T)-3')
Chain IDs:B (auth: D)
Chain Length:34
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*GP*CP*TP*TP*CP*GP*TP*GP*TP*AP*TP*AP*C)-3')
Chain IDs:C (auth: P)
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*TP*AP*GP*A)-3')
Chain IDs:D (auth: X)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
GTP
MG
Primary Citation
CryoEM structure of ThermoCas9 in post-cleavage state with a DNA containing NNNNCGA PAM
To be Published ? ? ? (?)
Primary Citation of related structures
9BS6