9BPJ image
Entry Detail
PDB ID:
9BPJ
EMDB ID:
Title:
Human light chain ferritin reacted with iron (3 Fe2+ to ferritin monomer ratio). Reconstruction of particles with one nanoparticle
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-05-07
Release Date:
2025-05-14
Method Details:
Experimental Method:
Resolution:
2.85 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ferritin light chain
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X
Chain Length:174
Number of Molecules:24
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Observation of the Protein-Inorganic Interface of Ferritin by Cryo-Electron Microscopy.
J.Am.Chem.Soc. 147 3333 3340 (2025)
PMID: 39815632 DOI: 10.1021/jacs.4c13873

Abstact

Visualizing the structure of the protein-inorganic interface is critically important for a more complete understanding of biomineralization. Unfortunately, there are limited approaches for the direct and detailed study of biomolecules that interact with inorganic materials. Here, we use single-particle cryo-electron microscopy (cryo-EM) to study the protein-nanoparticle (NP) interactions of human light chain ferritin and visualize the high-resolution details of the protein-inorganic interface. In this work, we determined the 2.85 Å structure of human light chain ferritin bound to its native iron oxide NP substrate. The resulting cryo-EM maps confirmed and enhanced previously proposed interactions of the protein with the material along the B-helix and revealed new interaction at the C-terminus of light chain ferritin. This work sheds new light on the mechanisms of ferritin biomineralization and further demonstrates the application of cryo-EM for the study of protein-inorganic systems.

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Primary Citation of related structures