9BCH image
Deposition Date 2024-04-09
Release Date 2025-01-08
Last Version Date 2025-01-08
Entry Detail
PDB ID:
9BCH
Keywords:
Title:
Solution structure of the hemoglobin receptor HbpA from Corynebacterium diphtheriae
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Membrane protein
Gene (Uniprot):DIP2330
Chain IDs:A
Chain Length:198
Number of Molecules:1
Biological Source:Corynebacterium diphtheriae NCTC 13129
Ligand Molecules
Primary Citation
Molecular basis of hemoglobin binding and heme removal in Corynebacterium diphtheriae.
Proc.Natl.Acad.Sci.USA 122 e2411833122 e2411833122 (2025)
PMID: 39739808 DOI: 10.1073/pnas.2411833122

Abstact

To successfully mount infections, nearly all bacterial pathogens must acquire iron, a key metal cofactor that primarily resides within human hemoglobin. Corynebacterium diphtheriae causes the life-threatening respiratory disease diphtheria and captures hemoglobin for iron scavenging using the surface-displayed receptor HbpA. Here, we show using X-ray crystallography, NMR, and in situ binding measurements that C. diphtheriae selectively captures iron-loaded hemoglobin by partially ensconcing the heme molecules of its α subunits. Quantitative growth and heme release measurements are compatible with C. diphtheriae acquiring heme passively released from hemoglobin's β subunits. We propose a model in which HbpA and heme-binding receptors collectively function on the C. diphtheriae surface to capture hemoglobin and its spontaneously released heme. Acquisition mechanisms that exploit the propensity of hemoglobin's β subunit to release heme likely represent a common strategy used by bacterial pathogens to obtain iron during infections.

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Primary Citation of related structures