9B9F image
Entry Detail
PDB ID:
9B9F
Title:
Zebrafish Betaglycan Orphan Domain (zfBGo) in complex with TGF-B3 and extracellular domains of TGFBRI and TGFBRII
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-04-02
Release Date:
2025-03-12
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transforming growth factor beta-3
Chain IDs:A, F
Chain Length:112
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Transforming growth factor beta-3 triple mutant
Mutations:R325E,Y390A,R394E
Chain IDs:B, G
Chain Length:112
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Transforming growth factor beta receptor type-1
Chain IDs:C, H
Chain Length:87
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Transforming growth factor beta receptor type-2
Chain IDs:D, I
Chain Length:113
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Transforming growth factor beta receptor type-3
Mutations:C150G,C277G
Chain IDs:E, J
Chain Length:338
Number of Molecules:2
Biological Source:Danio rerio
Ligand Molecules
Primary Citation
Structures of TGF-beta with betaglycan and signaling receptors reveal mechanisms of complex assembly and signaling.
Nat Commun 16 1778 1778 (2025)
PMID: 40011426 DOI: 10.1038/s41467-025-56796-9

Abstact

Betaglycan (BG) is a transmembrane co-receptor of the transforming growth factor-β (TGF-β) family of signaling ligands. It is essential for embryonic development, tissue homeostasis and fertility in adults. It functions by enabling binding of the three TGF-β isoforms to their signaling receptors and is additionally required for inhibin A (InhA) activity. Despite its requirement for the functions of TGF-βs and InhA in vivo, structural information explaining BG ligand selectivity and its mechanism of action is lacking. Here, we determine the structure of TGF-β bound both to BG and the signaling receptors, TGFBR1 and TGFBR2. We identify key regions responsible for ligand engagement, which has revealed binding interfaces that differ from those described for the closely related co-receptor of the TGF-β family, endoglin, thus demonstrating remarkable evolutionary adaptation to enable ligand selectivity. Finally, we provide a structural explanation for the hand-off mechanism underlying TGF-β signal potentiation.

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Primary Citation of related structures