9B4I image
Deposition Date 2024-03-20
Release Date 2025-03-12
Last Version Date 2025-07-23
Entry Detail
PDB ID:
9B4I
Title:
Filament of D-TLKIVWI, a D-peptide that disaggregates Alzheimer's Paired Helical Filaments, determined by Cryo-EM
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.60 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(D)
Molecule:DTH-DLE-DLY-DIL-DVA-DTR-DIL
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA (auth: 0), BA (auth: 1), CA (auth: 2), DA (auth: 3), EA (auth: 4), FA (auth: 5), GA (auth: 6), HA (auth: 7), IA (auth: 8), JA (auth: 9), KA (auth: a), LA (auth: b), MA (auth: c), NA (auth: d), OA (auth: e), PA (auth: f), QA (auth: g), RA (auth: h), SA (auth: i), TA (auth: j), UA (auth: k), VA (auth: l), WA (auth: m), XA (auth: n), YA (auth: o), ZA (auth: p), AB (auth: q), BB (auth: r), CB (auth: s), DB (auth: t), EB (auth: u), FB (auth: v), GB (auth: w), HB (auth: x)
Chain Length:7
Number of Molecules:60
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
How short peptides disassemble tau fibrils in Alzheimer's disease.
Nature ? ? ? (2025)
PMID: 40634605 DOI: 10.1038/s41586-025-09244-z

Abstact

Reducing fibrous aggregates of the protein tau is a possible strategy for halting the progression of Alzheimer's disease (AD)1. Previously, we found that in vitro, the D-enantiomeric peptide (D-peptide) D-TLKIVWC disassembles ultra-stable tau fibrils extracted from the autopsied brains of individuals with AD (hereafter, these tau fibrils are referred to as AD-tau) into benign segments, with no energy source other than ambient thermal agitation2. To consider D-peptide-mediated disassembly as a potential route to therapeutics for AD, it is essential to understand the mechanism and energy source of the disassembly action. Here, we show that the assembly of D-peptides into amyloid-like ('mock-amyloid') fibrils is essential for AD-tau disassembly. These mock-amyloid fibrils have a right-handed twist but are constrained to adopt a left-handed twist when templated in complex with AD-tau. The release of strain that accompanies the conversion of left-twisted to right-twisted, relaxed mock-amyloid produces a torque that is sufficient to break the local hydrogen bonding between tau molecules, and leads to the fragmentation of AD-tau. This strain-relief mechanism seems to operate in other examples of amyloid fibril disassembly, and could inform the development of first-in-class therapeutics for amyloid diseases.

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Primary Citation of related structures