9B0T image
Deposition Date 2024-03-12
Release Date 2025-02-12
Last Version Date 2025-04-16
Entry Detail
PDB ID:
9B0T
Keywords:
Title:
Cryo-EM structure of E227Q variant of uMtCK1 in complex with transition state analog
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Creatine kinase U-type, mitochondrial
Gene (Uniprot):CKMT1A, CKMT1B
Mutations:E227Q
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:418
Number of Molecules:8
Biological Source:Homo sapiens
Primary Citation
Structural basis for substrate binding, catalysis, and inhibition of cancer target mitochondrial creatine kinase by a covalent inhibitor.
Structure 33 786 797.e3 (2025)
PMID: 39904336 DOI: 10.1016/j.str.2025.01.008

Abstact

Mitochondrial creatine kinases (MtCKs) are key players in maintaining energy homeostasis in cells that work with cytosolic creatine kinases for energy transport from mitochondria to cytoplasm. The inhibition of breast cancer growth by cyclocreatine targeting CKs indicates dependence of cancer cells on the "energy shuttle" for cell growth and survival. Hence, understanding key mechanistic features of creatine kinases and their inhibition plays an important role in the development of cancer therapeutics. Herein, we present mutational and structural investigations on understudied ubiquitous MtCK that showed closure of the loop comprising His61 is specific to and relies on creatine binding and mechanism of phosphoryl transfer depends on electrostatics of active site. We demonstrate that previously identified pan-CK covalent inhibitor CKi inhibit breast cancer cell proliferation; however, our biochemical and structural data indicated that inhibition by CKi is highly dependent on covalent link formation and conformational changes upon creatine binding are not observed.

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