9AZM image
Deposition Date 2024-03-11
Release Date 2025-04-30
Last Version Date 2025-04-30
Entry Detail
PDB ID:
9AZM
Keywords:
RIBOSOME
Title:
In situ human ribosome (Focused on 40S with SERBP1 CTD)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.68 Å
Aggregation State:
CELL
Reconstruction Method:
SINGLE PARTICLE
9AZM validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serbp1
Chain IDs:A (auth: CD)
Chain Length:85
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q8NC51
Polymer Type:polyribonucleotide
Molecule:18S rRNA
Chain IDs:P (auth: S2)
Chain Length:1740
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein uS3
Gene (Uniprot):RPS3
Chain IDs:B (auth: SD)
Chain Length:227
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P23396 Pfam ID:PF07650, PF00189
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5
Gene (Uniprot):RPS5
Chain IDs:C (auth: SF)
Chain Length:189
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P46782 Pfam ID:PF00177
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S10
Gene (Uniprot):RPS10
Chain IDs:D (auth: SK)
Chain Length:98
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P46783 Pfam ID:PF03501
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS12
Gene (Uniprot):RPS12
Chain IDs:M (auth: SM)
Chain Length:122
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P25398 Pfam ID:PF01248
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein uS19
Gene (Uniprot):RPS15
Chain IDs:E (auth: SP)
Chain Length:121
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62841 Pfam ID:PF00203
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein uS9
Gene (Uniprot):RPS16
Chain IDs:F (auth: SQ)
Chain Length:144
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62249 Pfam ID:PF00380
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S18
Gene (Uniprot):RPS18
Chain IDs:G (auth: SS)
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62269 Pfam ID:PF00416
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):RPS19
Chain IDs:H (auth: ST)
Chain Length:143
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P39019 Pfam ID:PF01090
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S20
Gene (Uniprot):RPS20
Chain IDs:I (auth: SU)
Chain Length:104
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P60866 Pfam ID:PF00338
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS25
Gene (Uniprot):RPS25
Chain IDs:N (auth: SZ)
Chain Length:75
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62851 Pfam ID:PF03297
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28
Gene (Uniprot):RPS28
Chain IDs:J (auth: Sc)
Chain Length:64
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62857 Pfam ID:PF01200
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29
Gene (Uniprot):RPS29
Chain IDs:K (auth: Sd)
Chain Length:227
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62273 Pfam ID:PF00253
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-40S ribosomal protein S27a
Gene (Uniprot):RPS27A
Chain IDs:O (auth: Sf)
Chain Length:189
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62979 Pfam ID:PF01599
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Receptor of activated protein C kinase 1
Gene (Uniprot):RACK1
Chain IDs:L (auth: Sg)
Chain Length:313
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P63244 Pfam ID:PF00400
Ligand Molecules
NA
Primary Citation
In situ human ribosome (Focused on 40S with SERBP1 CTD)
To Be Published ? ? ? (?)
Primary Citation of related structures
9AZM