9AXP image
Entry Detail
PDB ID:
9AXP
Keywords:
Title:
Crystal Structure of HY11-7E1_Hu3 Fab in Complex with Carfentanil
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-03-06
Release Date:
2024-10-02
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
I 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HY11-7E1_Hu3 Fab Heavy Chain
Chain IDs:A, C (auth: H)
Chain Length:226
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:HY11-7E1_Hu3 Fab Light Chain
Chain IDs:B, D (auth: L)
Chain Length:214
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
Structure-Based Engineering of Monoclonal Antibodies for Improved Binding to Counteract the Effects of Fentanyl and Carfentanil.
Acs Omega 9 42506 42519 (2024)
PMID: 39431098 DOI: 10.1021/acsomega.4c06617

Abstact

The opioid overdose epidemic is a growing and evolving public health crisis fueled by the widespread presence of fentanyl and fentanyl analogues (F/FAs) in both street mixtures and counterfeit pills. To expand current treatment options, drug-targeting monoclonal antibodies (mAbs) offer a viable therapeutic for both pre- and postexposure clinical scenarios. This study reports the isolation, in vitro characterization, and in vivo efficacy of two murine mAb families targeting fentanyl, carfentanil, or both. Because humanization of the mAbs by CDR grafting negatively impacted affinity for both fentanyl and carfentanil, crystal structures of mAbs in complex with fentanyl or carfentanil were analyzed to identify key residues involved in ligand binding in murine versus humanized structures, and site-directed mutagenesis was used to verify their functional importance. The structural analysis identified a framework residue, Tyr36, present in the murine germline sequence of two mAbs, which was critical for binding to fentanyl and carfentanil. These studies emphasize the importance of structural considerations in mAb engineering to optimize mAbs targeting small molecules including opioids and other drugs of public health interest.

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