9AVK image
Deposition Date 2024-03-04
Release Date 2024-05-08
Last Version Date 2024-06-12
Entry Detail
PDB ID:
9AVK
Title:
Structure of long Rib domain from Limosilactobacillus reuteri
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.46 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:YSIRK signal domain/LPXTG anchor domain surface protein
Gene (Uniprot):DB325_02015
Chain IDs:A
Chain Length:104
Number of Molecules:1
Biological Source:Limosilactobacillus reuteri
Primary Citation
Crystal structure of the long Rib domain of the LPXTG-anchored surface protein from Limosilactobacillus reuteri.
Acta Crystallogr.,Sect.F 80 92 97 (2024)
PMID: 38699970 DOI: 10.1107/S2053230X24003868

Abstact

The Rib domain, which is often found as tandem-repeat structural modules in surface proteins of Gram-positive bacteria, plays important roles in mediating interactions of bacteria with their environments and hosts. A comprehensive structural analysis of various Rib domains is essential to fully understand their impact on the structure and functionality of these bacterial adhesins. To date, structural information has been limited for this expansive group of domains. In this study, the high-resolution crystal structure of the second member of the long Rib domain, a unique subclass within the Rib-domain family, derived from Limosilactobacillus reuteri is presented. The data not only demonstrate a highly conserved structure within the long Rib domain, but also highlight an evolutionary convergence in structural architecture with other modular domains found in cell-adhesion molecules.

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