8ZNK image
Deposition Date 2024-05-27
Release Date 2025-02-19
Last Version Date 2025-09-10
Entry Detail
PDB ID:
8ZNK
Keywords:
Title:
chromone glycosyltransferase (UGT93BB1,SdUGT2)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.88 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:chromone glycosyltransferase (UGT93BB1)
Chain IDs:A, B
Chain Length:473
Number of Molecules:2
Biological Source:Saposhnikovia divaricata
Ligand Molecules
Primary Citation
Complete biosynthetic pathway of furochromones in Saposhnikovia divaricata and its evolutionary mechanism in Apiaceae plants.
Nat Commun 16 3109 3109 (2025)
PMID: 40169603 DOI: 10.1038/s41467-025-58498-8

Abstact

Furochromones are specific bioactive secondary metabolites of many Apiaceae plants. Their biosynthesis remains largely unexplored. In this work, we dissect the complete biosynthetic pathway of major furochromones in the medicinal plant Saposhnikovia divaricata by characterizing prenyltransferase, peucenin cyclase, methyltransferase, hydroxylase, and glycosyltransferases. De novo biosynthesis of prim-O-glucosylcimifugin and 5-O-methylvisamminoside is realized in Nicotiana benthamiana leaves. Through comparative genomic and transcriptomic analyses, we further find that proximal duplication and high expression of a pentaketide chromone synthase gene SdPCS, together with the presence of a lineage-specific peucenin cyclase gene SdPC, lead to the predominant accumulation of furochromones in the roots of S. divaricata among surveyed Apiaceae plants. This study paves the way for metabolic engineering production of furochromones, and sheds light into evolutionary mechanisms of furochromone biosynthesis among Apiaceae plants.

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Primary Citation of related structures