8ZM3 image
Deposition Date 2024-05-22
Release Date 2024-12-11
Last Version Date 2024-12-11
Entry Detail
PDB ID:
8ZM3
Keywords:
IMMUNE SYSTEM/RNA
Title:
Cryo-EM strcuture of Cas5-HNH Cascade,apo-Conf2
Biological Source:
Source Organism:
Candidatus Cloacimonetes bacterium ADurb.Bin088 (Taxon ID: 1852835)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8ZM3 validation report
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:RNA (61-MER)
Chain IDs:A
Chain Length:61
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CRISPR system Cascade subunit CasD
Gene (Uniprot):casD
Chain IDs:J (auth: B)
Chain Length:388
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088
UniProt ID:A0A1V6F8C5 Pfam ID:PF09704, PF01844
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CRISPR-associated protein Cse1 (CRISPR_cse1)
Gene (Uniprot):BWX75_00747
Chain IDs:B (auth: C)
Chain Length:535
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088
UniProt ID:A0A1V6F8D1 Pfam ID:PF09481
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CRISPR-associated endoribonuclease Cse3
Gene (Uniprot):cse3
Chain IDs:K (auth: D)
Chain Length:272
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088
UniProt ID:A0A1V6F8C4 Pfam ID:PF08798
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CRISPR-associated protein Cse2 (CRISPR_cse2)
Gene (Uniprot):BWX75_00748
Chain IDs:C (auth: E)
Chain Length:174
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088
UniProt ID:A0A1V6F8C9 Pfam ID:PF09485
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CRISPR system Cascade subunit CasC
Gene (Uniprot):casC
Chain IDs:D (auth: F), E (auth: H), F (auth: I), G (auth: J), H (auth: K), I (auth: G)
Chain Length:378
Number of Molecules:6
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088
UniProt ID:A0A1V6F8B5 Pfam ID:PF09344
Ligand Molecules
MG
Primary Citation
Cryo-EM structure of Cas5-HNH Cascade,apo-Conf2
To Be Published ? ? ? (?)
Primary Citation of related structures
8ZM3