ISDA

Entry Detail

PDB ID:

8ZM3

EMDB ID:

EMD-60235

Keywords:

IMMUNE SYSTEM/RNA

Title:

Cryo-EM strcuture of Cas5-HNH Cascade,apo-Conf2

Biological Source:

Source Organism:

Candidatus Cloacimonetes bacterium ADurb.Bin088

Host Organism:

Escherichia coli

PDB Version:

Deposition Date:

2024-05-22

Release Date:

2024-12-11

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.10 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polyribonucleotide
Description:RNA (61-MER)
Chain IDs:A
Chain Length:61
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088

Protein Blast

Polymer Type:polypeptide(L)
Description:CRISPR system Cascade subunit CasD
Chain IDs:J (auth: B)
Chain Length:388
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088

UniProt ID:A0A1V6F8C5 Pfam ID:PF09704, PF01844

Protein Blast

Polymer Type:polypeptide(L)
Description:CRISPR-associated protein Cse1 (CRISPR_cse1)
Chain IDs:B (auth: C)
Chain Length:535
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088

UniProt ID:A0A1V6F8D1 Pfam ID:PF09481

Protein Blast

Polymer Type:polypeptide(L)
Description:CRISPR-associated endoribonuclease Cse3
Chain IDs:K (auth: D)
Chain Length:272
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088

UniProt ID:A0A1V6F8C4 Pfam ID:PF08798

Protein Blast

Polymer Type:polypeptide(L)
Description:CRISPR-associated protein Cse2 (CRISPR_cse2)
Chain IDs:C (auth: E)
Chain Length:174
Number of Molecules:1
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088

UniProt ID:A0A1V6F8C9 Pfam ID:PF09485

Protein Blast

Polymer Type:polypeptide(L)
Description:CRISPR system Cascade subunit CasC
Chain IDs:D (auth: F), E (auth: H), F (auth: I), G (auth: J), H (auth: K), I (auth: G)
Chain Length:378
Number of Molecules:6
Biological Source:Candidatus Cloacimonetes bacterium ADurb.Bin088

UniProt ID:A0A1V6F8B5 Pfam ID:PF09344

Ligand Molecules

Primary Citation

Cryo-EM structure of Cas5-HNH Cascade,apo-Conf2

Liu, Y.N, Wang, L.Show

To Be Published ? ? ? (?)

Primary Citation of related structures