8ZM0 image
Deposition Date 2024-05-21
Release Date 2025-05-21
Last Version Date 2025-12-24
Entry Detail
PDB ID:
8ZM0
Keywords:
Title:
A self-assembled nanofiber
Biological Source:
Source Organism(s):
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
3D ARRAY
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TYR-ALA-TRP-PHE
Chain IDs:A (auth: a), B (auth: b), C (auth: d), D (auth: f), E (auth: g), F (auth: s), G (auth: B), H (auth: N), I (auth: h), J (auth: n), K (auth: t), L (auth: z), M (auth: C), N (auth: I), O, P (auth: i), Q (auth: o), R (auth: u), S (auth: 0), T (auth: D), U (auth: J), V (auth: P), W (auth: j), X (auth: p), Y (auth: v), Z (auth: 1), AA (auth: k), BA (auth: S), CA (auth: T), DA (auth: V), EA (auth: Y), FA (auth: 6), GA (auth: 7), HA (auth: A), IA (auth: G), JA (auth: M), KA (auth: U), LA (auth: m), MA (auth: 9), NA (auth: y), OA (auth: H), PA (auth: 5), QA (auth: W), RA (auth: 4), SA (auth: X), TA (auth: Z), UA (auth: E), VA (auth: K), WA (auth: Q), XA (auth: c), YA (auth: 8), ZA (auth: q), AB (auth: w), BB (auth: 2), CB (auth: F), DB (auth: L), EB (auth: R), FB (auth: e), GB (auth: l), HB (auth: r), IB (auth: x), JB (auth: 3)
Chain Length:4
Number of Molecules:62
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Water-regulated viscosity-plasticity phase transitions in a peptide self-assembled muscle-like hydrogel.
Nat Commun 16 1058 1058 (2025)
PMID: 39865087 DOI: 10.1038/s41467-025-56415-7

Abstact

The self-assembly of small molecules through non-covalent interactions is an emerging and promising strategy for building dynamic, stable, and large-scale structures. One remaining challenge is making the non-covalent interactions occur in the ideal positions to generate strength comparable to that of covalent bonds. This work shows that small molecule YAWF can self-assemble into a liquid-crystal hydrogel (LCH), the mechanical properties of which could be controlled by water. LCH can be used to construct stable solid threads with a length of over 1 meter by applying an external force on 2 µL of gel solution followed by water-regulated crystallization. These solid threads can support 250 times their weight. Cryogenic electron microscopy (Cryo-EM) analysis unravels the three-dimensional structure of the liquid-crystal fiber (elongated helix with C2 symmetry) at an atomic resolution. The multiscale mechanics of this material depend on the specificity of the molecular structure, and the water-controlled hierarchical and sophisticated self-assembly.

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Primary Citation of related structures
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