8ZDW image
Entry Detail
PDB ID:
8ZDW
EMDB ID:
EMD-60015
Keywords:
VIRAL PROTEIN/IMMUNE SYSTEM
Title:
The cryoEM structure of H5N1 HA split from symmetric filament in conformation A
Biological Source:
Source Organism:
Influenza A virus (strain A/Vietnam/1203/2004 H5N1), Mus musculus
Host Organism:
Homo sapiens
PDB Version:
Deposition Date:
2024-05-03
Release Date:
2024-09-25
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.45 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
8ZDW validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Hemagglutinin
Chain IDs:A, K (auth: C), L (auth: H)
Chain Length:337
Number of Molecules:3
Biological Source:Influenza A virus (strain A/Vietnam/1203/2004 H5N1)
UniProt ID:Q6DQ33 Pfam ID:PF00509
Protein Blast
Polymer Type:polypeptide(L)
Description:Hemagglutinin
Chain IDs:B, E (auth: D), F (auth: I)
Chain Length:228
Number of Molecules:3
Biological Source:Influenza A virus (strain A/Vietnam/1203/2004 H5N1)
UniProt ID:Q6DQ33 Pfam ID:PF00509
Polymer Type:polypeptide(L)
Description:H5M9 Fab, light chain
Chain IDs:C (auth: R), I (auth: E), J
Chain Length:217
Number of Molecules:3
Biological Source:Mus musculus
Protein Blast
Polymer Type:polypeptide(L)
Description:Anti-H5N1 hemagglutinin monoclonal anitbody H5M9 heavy chain
Chain IDs:D (auth: U), G (auth: F), H (auth: L)
Chain Length:222
Number of Molecules:3
Biological Source:Mus musculus
UniProt ID:U5LP42 Pfam ID:PF07686, PF07654
Ligand Molecules
NAG
Primary Citation
Multivalent interactions between fully glycosylated influenza virus hemagglutinins mediated by glycans at distinct N-glycosylation sites
Npj Viruses 2 48 ? (2024)
DOI: 10.1038/s44298-024-00059-9
Primary Citation of related structures
8ZDW